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The map label for this gene is ybcD

Identifier: 49479522

GI number: 49479522

Start: 3012564

End: 3015188

Strand: Reverse

Name: ybcD

Synonym: BT9727_2937

Alternate gene names: NA

Gene position: 3015188-3012564 (Counterclockwise)

Preceding gene: 49479131

Following gene: 49479082

Centisome position: 57.57

GC content: 38.9

Gene sequence:

>2625_bases
ATGAGCATACCGTCAATATTAAGGAAAGAGACTTTAAAAAAGAAAGATAAAAATATTGATCTACAAGAAAATAATATAAA
TGATTTAGTTGTATCGGCTAGCCGAGTGATTGCGCCACTTTGGCCTATCTCTACATTTGCAGCTCATCACCCTTGGATGG
GGCTGGAAAAGCAATCATTTGAACAAGTTGCAAATTGGTTAAAAGAAGCTCGTAATGTGGATATTTATCCTAGTGCTTCC
ATGATTCATTCGGCAAAGGCGAAAGGTGAGATTGAGGAATCATTTTTACAAATTGCCTTGTCTCGTTGGCTTGATTCACA
ATCTTTTCATATGCCGCGAGAGACAGCGGAGCGTTTTTGTCAAGAAGCTTTAAAGTTAGAAAGGTTACCTTCTAGTCTAT
TATCATCGCCAGAATTAAATAAATTGGCAGAAGAAATAAATTATGTAAATACAGGGAGTATGAAAGACTCTTCTATGCAA
CCAATAAGCTCGCTTATAGAGAATCAAAATGGTGACAACCTATCGGATATTCTTAATTATCATATTATTAAATGGTGTAA
ATTATATCTTGATGACGCCGGGGCAAGTTGGGCGATGCCAAATCGAGAGAAAGGTTTTTATCGTGCGTGGCAACACCTTA
TTACATTTGATCCATCGCTCAGTAAAACTGAACGTAAAGTTTTAAAAGATTGGCCAGAAGATGCCCTTATAGCTTTAACA
AAAGCATTATCTGAATTAGGAATTTCTGAATCTAACATGCAAGCTTACCTTGAAGGGCACTTACTTTCTTTGCCTGGATG
GGCAGGAATGATACGATGGCGCTCGCAACAATCAATTGAGGAACAGGAACTTCTCATAGAATATTTAGCAGTTCGACTTT
CTATGGAGCTAGCCATTGTAAAACCGTATTTACCTTTAAAAAATCAAAAGGTTGAGAAAAAAGTTTCGATCGTCCCACTT
ATAGCTTCTTGGATCTATTGGGGGGATATTTCAATAGAGAAATGGTTACAAATGTCTGCAGCTGAACAAAGTGAATTATT
GGCATTCGCTTATCGCTTTGATGAAAATACTCGCAAGAAACTTTGGCTAGAAGCTTGGGAACAGACGCATGCAGAGCAAT
TAAGGGAGAAGATTGCTTCTAAGCAACGTGCAACTCATGATAAAAAGCGTGTAGTAGCTCAATTAGCATTTTGTATTGAT
GTACGTTCAGAACCGTTTCGTCGCCACCTTGAAAAATTAGGTCCGTTCGAAACGTTTGGAATAGCTGGTTTCTTTGGGTT
ACCAATTGCGACTACTGAACTAGGTAGTAATGACAGCCATCCTTCTTTGCCAGTTATATTAAAACCGAAACATCAAATAA
AAGAGCTAACAGATGAAAATGAATGTAAATCTTATGAACAACGTAAGATGGTAGGCAGTTCGGTACGTTATACATTTAAA
ACGATGAAACAGAACGTACTGACAAGTATGTTGCTACCTGAAGTAAGTGGTCCTTTACTTGGTTTACAAATGGTGACAAG
GAGTTTTGTGCCAAGAAGAGTAGGTGGCTTCATTCGTAACCTTCGTAAAAATATGTTGCAAAAGCCTGATACAACTTTCT
CGCTTAATCATGTTCATGATACAAACTGTGAGATACCAATCGGTTTTACGAAAGAAGAAAAAGTGAACTATGTGCGTCAA
GCTTTAAAAATGGTGGGATTAACAGAAGGTTTCGCTCCTTTAGTTGTAATGTGCGGCCACAGTAGTCAAAGTACGAACAA
TCCTTATGCTGCAGCGCTTGAGTGTGGTGCGTGTGGCGGAGCAGCGGGAGGATTTAATGCAAGAGTTTTCGCTACTTTAT
GTAATCTTCCAGAAGTGAGAGAGGCGTTGTCTGCTGAAGGTATTAAAATTCCCGATGACACCATTTTTGCAGCAGCTGAA
CATAAAACAACAGTGGATGAATTGGAATGGATTTACGTTCCAGAACTTTCGGAAACTGCGCAAGAAGCATTTGATTGTAT
TGAGGCCATTATGCCAAATGTGAGCCAACATGCAAATAGAGAGCGTTTAATGCAATTACCTCATTTTAAAACAAAAATAA
AAAATCCGAGTAAAGAGGCACACCGATTTGCAGAAGATTGGAGTGAAATACGTCCGGAATGGGGATTAGCACGTAATGCA
TCTTTTATTATCGGACAGCGTGAATTGACTCGGGATTGTGACTTAGAAGGTAGAGCTTTCCTTCATAATTATGATTGGAA
ACAGGATGAAAGTGGCGATATATTAGCTAACATCATAGCGGGACCGGGAACAGTAGCGCAGTGGATCAATCTACAATATT
ACGCTTCAACTGTAGCCCCTCATTATTATGGTAGTGGAAACAAAACAACACAAACCGTTACGGCAGGTCTTGGTGTTATG
CAAGGAAATGCAAGTGACTTGTTGCCAGGCTTACCTTGGCAATCCGTTATGCAGTCGGATCGTGAGACGTATCATTCACC
ACTCCGTTTATTAATTGTAATTCAAGCGCCTACTAAATATATAGAACGTTTGCTAAATAATAATTTCACATTTCGAGAAA
AAGTTCAAAATAAATGGGTTAGACTTGCCAGTGTTGATCCAGAGGGACGTTGGAAAAATTGGTAA

Upstream 100 bases:

>100_bases
TTTATCTTTGGTCAGTTCGAGTAGGTGAGGCGAGACGAAAGTCAGTAGAAAGTCATCCAAGCTATCTGAAACATGATGTA
TCAAAGGGAGGTAATTCGTG

Downstream 100 bases:

>100_bases
CAATTATGTAATGAATACTCAACAATTGTTACTAGTTTAAAAGTTCTATAAATACAATCATGAAGAAGGAGTGCTATATA
TGAATGCAAAGAAGAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 874; Mature: 873

Protein sequence:

>874_residues
MSIPSILRKETLKKKDKNIDLQENNINDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSAS
MIHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFCQEALKLERLPSSLLSSPELNKLAEEINYVNTGSMKDSSMQ
PISSLIENQNGDNLSDILNYHIIKWCKLYLDDAGASWAMPNREKGFYRAWQHLITFDPSLSKTERKVLKDWPEDALIALT
KALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLIEYLAVRLSMELAIVKPYLPLKNQKVEKKVSIVPL
IASWIYWGDISIEKWLQMSAAEQSELLAFAYRFDENTRKKLWLEAWEQTHAEQLREKIASKQRATHDKKRVVAQLAFCID
VRSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNDSHPSLPVILKPKHQIKELTDENECKSYEQRKMVGSSVRYTFK
TMKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRRVGGFIRNLRKNMLQKPDTTFSLNHVHDTNCEIPIGFTKEEKVNYVRQ
ALKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGIKIPDDTIFAAAE
HKTTVDELEWIYVPELSETAQEAFDCIEAIMPNVSQHANRERLMQLPHFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNA
SFIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILANIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVM
QGNASDLLPGLPWQSVMQSDRETYHSPLRLLIVIQAPTKYIERLLNNNFTFREKVQNKWVRLASVDPEGRWKNW

Sequences:

>Translated_874_residues
MSIPSILRKETLKKKDKNIDLQENNINDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSAS
MIHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFCQEALKLERLPSSLLSSPELNKLAEEINYVNTGSMKDSSMQ
PISSLIENQNGDNLSDILNYHIIKWCKLYLDDAGASWAMPNREKGFYRAWQHLITFDPSLSKTERKVLKDWPEDALIALT
KALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLIEYLAVRLSMELAIVKPYLPLKNQKVEKKVSIVPL
IASWIYWGDISIEKWLQMSAAEQSELLAFAYRFDENTRKKLWLEAWEQTHAEQLREKIASKQRATHDKKRVVAQLAFCID
VRSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNDSHPSLPVILKPKHQIKELTDENECKSYEQRKMVGSSVRYTFK
TMKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRRVGGFIRNLRKNMLQKPDTTFSLNHVHDTNCEIPIGFTKEEKVNYVRQ
ALKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGIKIPDDTIFAAAE
HKTTVDELEWIYVPELSETAQEAFDCIEAIMPNVSQHANRERLMQLPHFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNA
SFIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILANIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVM
QGNASDLLPGLPWQSVMQSDRETYHSPLRLLIVIQAPTKYIERLLNNNFTFREKVQNKWVRLASVDPEGRWKNW
>Mature_873_residues
SIPSILRKETLKKKDKNIDLQENNINDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSASM
IHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFCQEALKLERLPSSLLSSPELNKLAEEINYVNTGSMKDSSMQP
ISSLIENQNGDNLSDILNYHIIKWCKLYLDDAGASWAMPNREKGFYRAWQHLITFDPSLSKTERKVLKDWPEDALIALTK
ALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLIEYLAVRLSMELAIVKPYLPLKNQKVEKKVSIVPLI
ASWIYWGDISIEKWLQMSAAEQSELLAFAYRFDENTRKKLWLEAWEQTHAEQLREKIASKQRATHDKKRVVAQLAFCIDV
RSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNDSHPSLPVILKPKHQIKELTDENECKSYEQRKMVGSSVRYTFKT
MKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRRVGGFIRNLRKNMLQKPDTTFSLNHVHDTNCEIPIGFTKEEKVNYVRQA
LKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGIKIPDDTIFAAAEH
KTTVDELEWIYVPELSETAQEAFDCIEAIMPNVSQHANRERLMQLPHFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNAS
FIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILANIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVMQ
GNASDLLPGLPWQSVMQSDRETYHSPLRLLIVIQAPTKYIERLLNNNFTFREKVQNKWVRLASVDPEGRWKNW

Specific function: Unknown

COG id: COG3002

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0753 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018752 [H]

Pfam domain/function: PF10070 DUF2309 [H]

EC number: NA

Molecular weight: Translated: 99337; Mature: 99205

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPSILRKETLKKKDKNIDLQENNINDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSF
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHH
EQVANWLKEARNVDIYPSASMIHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFC
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QEALKLERLPSSLLSSPELNKLAEEINYVNTGSMKDSSMQPISSLIENQNGDNLSDILNY
HHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
HIIKWCKLYLDDAGASWAMPNREKGFYRAWQHLITFDPSLSKTERKVLKDWPEDALIALT
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHH
KALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLIEYLAVRLSMELAIV
HHHHHHCCCHHHHHHHHCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEE
KPYLPLKNQKVEKKVSIVPLIASWIYWGDISIEKWLQMSAAEQSELLAFAYRFDENTRKK
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LWLEAWEQTHAEQLREKIASKQRATHDKKRVVAQLAFCIDVRSEPFRRHLEKLGPFETFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHC
IAGFFGLPIATTELGSNDSHPSLPVILKPKHQIKELTDENECKSYEQRKMVGSSVRYTFK
CCHHHCCCEEEEECCCCCCCCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TMKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRRVGGFIRNLRKNMLQKPDTTFSLNHVHD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEC
TNCEIPIGFTKEEKVNYVRQALKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGG
CCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCC
AAGGFNARVFATLCNLPEVREALSAEGIKIPDDTIFAAAEHKTTVDELEWIYVPELSETA
CCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHCCEEECCCHHHHH
QEAFDCIEAIMPNVSQHANRERLMQLPHFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNA
HHHHHHHHHHHCCHHHHCCHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
SFIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILANIIAGPGTVAQWINLQYYASTVAP
EEEECCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHCC
HYYGSGNKTTQTVTAGLGVMQGNASDLLPGLPWQSVMQSDRETYHSPLRLLIVIQAPTKY
CEECCCCCCHHHHHHCCCEECCCHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCHHH
IERLLNNNFTFREKVQNKWVRLASVDPEGRWKNW
HHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCCC
>Mature Secondary Structure 
SIPSILRKETLKKKDKNIDLQENNINDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSF
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHH
EQVANWLKEARNVDIYPSASMIHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFC
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QEALKLERLPSSLLSSPELNKLAEEINYVNTGSMKDSSMQPISSLIENQNGDNLSDILNY
HHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
HIIKWCKLYLDDAGASWAMPNREKGFYRAWQHLITFDPSLSKTERKVLKDWPEDALIALT
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHH
KALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLIEYLAVRLSMELAIV
HHHHHHCCCHHHHHHHHCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEE
KPYLPLKNQKVEKKVSIVPLIASWIYWGDISIEKWLQMSAAEQSELLAFAYRFDENTRKK
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LWLEAWEQTHAEQLREKIASKQRATHDKKRVVAQLAFCIDVRSEPFRRHLEKLGPFETFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHC
IAGFFGLPIATTELGSNDSHPSLPVILKPKHQIKELTDENECKSYEQRKMVGSSVRYTFK
CCHHHCCCEEEEECCCCCCCCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TMKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRRVGGFIRNLRKNMLQKPDTTFSLNHVHD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEC
TNCEIPIGFTKEEKVNYVRQALKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGG
CCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCC
AAGGFNARVFATLCNLPEVREALSAEGIKIPDDTIFAAAEHKTTVDELEWIYVPELSETA
CCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHCCEEECCCHHHHH
QEAFDCIEAIMPNVSQHANRERLMQLPHFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNA
HHHHHHHHHHHCCHHHHCCHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
SFIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILANIIAGPGTVAQWINLQYYASTVAP
EEEECCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHCC
HYYGSGNKTTQTVTAGLGVMQGNASDLLPGLPWQSVMQSDRETYHSPLRLLIVIQAPTKY
CEECCCCCCHHHHHHCCCEECCCHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCHHH
IERLLNNNFTFREKVQNKWVRLASVDPEGRWKNW
HHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA