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The map label for this gene is ywqD [H]

Identifier: 49478949

GI number: 49478949

Start: 5014938

End: 5015615

Strand: Reverse

Name: ywqD [H]

Synonym: BT9727_4960

Alternate gene names: 49478949

Gene position: 5015615-5014938 (Counterclockwise)

Preceding gene: 49481248

Following gene: 49478948

Centisome position: 95.76

GC content: 34.66

Gene sequence:

>678_bases
ATGTTCGGAAGAAAGAAAAGAAAGCCATTAAGACAATTAATTACACATAAAGAGCCTAAATCACGCATTACGGAACAGTA
CCGTAATATCCGTACAAATATTGAATTTACATCTGTAGATAACCATATTCGTTCTATCATTGTCACTTCGGCAGATCCAG
GTGATGGGAAAACAACGACCATTTCTAATCTAGCAGTTGTTTTTGGACAACAAGGTAAAAAAGTATTGTTAATTGGAGCT
GACTTACGTAAGCCAACATTGCAAAATTTATTCGCTGCACACAATCCAAATGGATTAACGAATTTATTATCAGGACAAGC
ATCATTTGTGCAATGTATTCAAAAAACAGACATAGAGAACGTATATGTTATGTCAGCGGGTCCAATCCCACCAAACCCAG
CAGAGCTACTTGGGTATCGTAAAATGGACGAATTACTTCTAGAGGCATATAACATGTTTGATATCGTTTTGATTGATACA
CCACCTGTATTGGCCGTTACAGATGCACAAATACTCGCTAATAAATGTGATGGAGTTATATTAGTAGCACGCAGTGAAAA
AACAGAAAAAGATAAACTAATAAAAGCGAAACAAATATTAGATAAAGCATCTGGAAAACTACTTGGTGTTATATTAAACG
ATAAAAGAGAAGAACAAGAACAATATGGATATTATTAG

Upstream 100 bases:

>100_bases
GAAATTTAACGGTAGAAGTAAATGGAAAATTGGCGTAGCATATCGAGCATAAAAGAGAAAAAGTGGAAAATGTCGTATTC
TGAAAAAAGGAGACCATAAC

Downstream 100 bases:

>100_bases
AAAATAATGTATGAAATAGTATTTTTTAAAGCTAGTAATTTTTTGCTAGCTTTTTTGAATTATTTTAAAATTAAGTATCG
TATTATATAAAAAACATGAT

Product: tyrosine-protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MFGRKKRKPLRQLITHKEPKSRITEQYRNIRTNIEFTSVDNHIRSIIVTSADPGDGKTTTISNLAVVFGQQGKKVLLIGA
DLRKPTLQNLFAAHNPNGLTNLLSGQASFVQCIQKTDIENVYVMSAGPIPPNPAELLGYRKMDELLLEAYNMFDIVLIDT
PPVLAVTDAQILANKCDGVILVARSEKTEKDKLIKAKQILDKASGKLLGVILNDKREEQEQYGYY

Sequences:

>Translated_225_residues
MFGRKKRKPLRQLITHKEPKSRITEQYRNIRTNIEFTSVDNHIRSIIVTSADPGDGKTTTISNLAVVFGQQGKKVLLIGA
DLRKPTLQNLFAAHNPNGLTNLLSGQASFVQCIQKTDIENVYVMSAGPIPPNPAELLGYRKMDELLLEAYNMFDIVLIDT
PPVLAVTDAQILANKCDGVILVARSEKTEKDKLIKAKQILDKASGKLLGVILNDKREEQEQYGYY
>Mature_225_residues
MFGRKKRKPLRQLITHKEPKSRITEQYRNIRTNIEFTSVDNHIRSIIVTSADPGDGKTTTISNLAVVFGQQGKKVLLIGA
DLRKPTLQNLFAAHNPNGLTNLLSGQASFVQCIQKTDIENVYVMSAGPIPPNPAELLGYRKMDELLLEAYNMFDIVLIDT
PPVLAVTDAQILANKCDGVILVARSEKTEKDKLIKAKQILDKASGKLLGVILNDKREEQEQYGYY

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner membrane (Probable) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI87082032, Length=223, Percent_Identity=34.0807174887892, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1787216, Length=195, Percent_Identity=35.8974358974359, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 25120; Mature: 25120

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGRKKRKPLRQLITHKEPKSRITEQYRNIRTNIEFTSVDNHIRSIIVTSADPGDGKTTT
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHEEEEEEECCCCCCCCEEE
ISNLAVVFGQQGKKVLLIGADLRKPTLQNLFAAHNPNGLTNLLSGQASFVQCIQKTDIEN
HHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCE
VYVMSAGPIPPNPAELLGYRKMDELLLEAYNMFDIVLIDTPPVLAVTDAQILANKCDGVI
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEECHHHHHHCCCCEE
LVARSEKTEKDKLIKAKQILDKASGKLLGVILNDKREEQEQYGYY
EEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCC
>Mature Secondary Structure
MFGRKKRKPLRQLITHKEPKSRITEQYRNIRTNIEFTSVDNHIRSIIVTSADPGDGKTTT
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHEEEEEEECCCCCCCCEEE
ISNLAVVFGQQGKKVLLIGADLRKPTLQNLFAAHNPNGLTNLLSGQASFVQCIQKTDIEN
HHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCE
VYVMSAGPIPPNPAELLGYRKMDELLLEAYNMFDIVLIDTPPVLAVTDAQILANKCDGVI
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEECHHHHHHCCCCEE
LVARSEKTEKDKLIKAKQILDKASGKLLGVILNDKREEQEQYGYY
EEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]