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The map label for this gene is capA

Identifier: 49478948

GI number: 49478948

Start: 5013921

End: 5014664

Strand: Reverse

Name: capA

Synonym: BT9727_4959

Alternate gene names: 49478948

Gene position: 5014664-5013921 (Counterclockwise)

Preceding gene: 49478949

Following gene: 49478947

Centisome position: 95.74

GC content: 34.41

Gene sequence:

>744_bases
ATGGAAGAAACAATTAGTTTGAAAGAGTTATTTCATATTTTAAAAAAACGTTTAGCAATGATCCTCGTAATCGCCTTTGG
TGCAGCTATTGTAAGTGCTATCATTAGCTTCTTCTTTATGACACCAATCTATCAATCTTCGACGCAAATTCTGGTTAACC
AAAAGAAACAAGAAGGAGCAATGATCCAAGCTGGTGAAGTCCAAACGAATATTCAATTAACGAATACATATAAGGTTATT
ATTAAAAGCCCAGTAATCTTAGAACAAGTAAATGAAAAATTAAATTTAAATATGACAGCGCAAGCTTTAACGAAGAAGAT
TAATGTTGCGAATGAAAAAGATTCACAAGTTATTTCTGTTACAGCTGATGATAAAGATCCAAAAGTAGCTCGTGATATTG
CAAATGCAACTGCGGATGTATTTAAAGGTGAAGTTGCAAAAATTATGAACGTGGATAACGTAACAGTACTATCTAAAGCA
GAAGTTGCAGAAAATCAATCTCCAATTAAACCACGTCCAATGTTAAATGTGGCAATTGCCTTCTTTGTTGGCTTAATGGC
CGCAGTTGGTCTTGCATTCTTACTAGAATACTTAGATAACACAGTAAAAAAAGAAGAAGATGTAGAGAACTTACTTGGTT
TACCAGTGTTAGGTATTGTAGCTCGTATGGATGAAGAAACAATGAACGTGAAATCACACGCTCCATCATCAAGAAAAGTG
AGGGGACAAACAATTGGCTCTTAA

Upstream 100 bases:

>100_bases
TTAAATAACAATCGTACATAGATATTACTAAAATAAAAAAATGTAAGATTATATGTTATAATTTTTCTTATGTGCAAATT
TTAGAAAGTTGGAGGAACTT

Downstream 100 bases:

>100_bases
TTTATTTAAAAAGAAAAAGAATCATCGTCAACGTCGTCAATTAATTGCTCATCAACAACCGAAATCACCAATTTCAGAAC
AATATCGTAATATTCGAACG

Product: chain length regulator (capsular polysaccharide biosynthesis)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGAMIQAGEVQTNIQLTNTYKVI
IKSPVILEQVNEKLNLNMTAQALTKKINVANEKDSQVISVTADDKDPKVARDIANATADVFKGEVAKIMNVDNVTVLSKA
EVAENQSPIKPRPMLNVAIAFFVGLMAAVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETMNVKSHAPSSRKV
RGQTIGS

Sequences:

>Translated_247_residues
MEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGAMIQAGEVQTNIQLTNTYKVI
IKSPVILEQVNEKLNLNMTAQALTKKINVANEKDSQVISVTADDKDPKVARDIANATADVFKGEVAKIMNVDNVTVLSKA
EVAENQSPIKPRPMLNVAIAFFVGLMAAVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETMNVKSHAPSSRKV
RGQTIGS
>Mature_247_residues
MEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGAMIQAGEVQTNIQLTNTYKVI
IKSPVILEQVNEKLNLNMTAQALTKKINVANEKDSQVISVTADDKDPKVARDIANATADVFKGEVAKIMNVDNVTVLSKA
EVAENQSPIKPRPMLNVAIAFFVGLMAAVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETMNVKSHAPSSRKV
RGQTIGS

Specific function: Required for YwqD kinase activity. May bring YwqD and its substrates into contact. Probably involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 27072; Mature: 27072

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHCCC
MIQAGEVQTNIQLTNTYKVIIKSPVILEQVNEKLNLNMTAQALTKKINVANEKDSQVISV
EEECCCEEEEEEEECEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEE
TADDKDPKVARDIANATADVFKGEVAKIMNVDNVTVLSKAEVAENQSPIKPRPMLNVAIA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHH
FFVGLMAAVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETMNVKSHAPSSRKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCCCCCC
RGQTIGS
CCCCCCC
>Mature Secondary Structure
MEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHCCC
MIQAGEVQTNIQLTNTYKVIIKSPVILEQVNEKLNLNMTAQALTKKINVANEKDSQVISV
EEECCCEEEEEEEECEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEE
TADDKDPKVARDIANATADVFKGEVAKIMNVDNVTVLSKAEVAENQSPIKPRPMLNVAIA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHH
FFVGLMAAVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETMNVKSHAPSSRKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCCCCCC
RGQTIGS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]