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The map label for this gene is ywqD [H]

Identifier: 49478947

GI number: 49478947

Start: 5013230

End: 5013931

Strand: Reverse

Name: ywqD [H]

Synonym: BT9727_4958

Alternate gene names: 49478947

Gene position: 5013931-5013230 (Counterclockwise)

Preceding gene: 49478948

Following gene: 49478946

Centisome position: 95.73

GC content: 36.47

Gene sequence:

>702_bases
TTGGCTCTTAATTTATTTAAAAAGAAAAAGAATCATCGTCAACGTCGTCAATTAATTGCTCATCAACAACCGAAATCACC
AATTTCAGAACAATATCGTAATATTCGAACGAATGTTGAGTTTGCAGCTGTTGATACGAATTTACATTCATTAATGGTAA
CGTCAGCGAACCCAAGTGAAGGGAAAACAACGACGACAGCGAATATGGCAGTTGTATTTGCTCAACAAGGAAAGAAAGTA
TTATTAATTGATGCAGATATGCGTAAACCAGCGATGCATCAAATGTTTCAAGTCGATAACATTTTTGGATTAACGAACGT
ATTAACACATAGTGAACGTTTAGAAAAATGTGTACAAACGACATCAGTTGATAATTTACACTTTTTAGCTTGTGGTCCAA
TCCCGCCAAATCCAGCGGAATTGTTAGGTTCAAAATCGATGCAAGAGCTTCTTGCACAAGCGTACAGTATGTATGATTTA
GTTATTTTCGATTTACCACCGATTTTAGCTGTGACTGATGCACAAATTATGGCAAATGTATGTGATGCTTCTATTCTTGT
CGTTCGTAGTGAATCGACAGAGAAAGAGTCAGCTGTAAAGGCAAAAGGGTTGTTGGAATCGGCTAAAGGTAAGTTATTAG
GTGTTGTTCTTAACGATCGTGAACGTGAACAAGGTCTATATTATTATTACGGTGCAAACTAA

Upstream 100 bases:

>100_bases
CTTGGTTTACCAGTGTTAGGTATTGTAGCTCGTATGGATGAAGAAACAATGAACGTGAAATCACACGCTCCATCATCAAG
AAAAGTGAGGGGACAAACAA

Downstream 100 bases:

>100_bases
TTAAAAGAGTGAGATATGGTTGAAACATATCTCCTTTTTCCCCTTGAATATGAGAGATCTCTCATATTCAAGGGGAAAAA
GATCTTTATAGGAGAGAGGG

Product: protein-tyrosine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MALNLFKKKKNHRQRRQLIAHQQPKSPISEQYRNIRTNVEFAAVDTNLHSLMVTSANPSEGKTTTTANMAVVFAQQGKKV
LLIDADMRKPAMHQMFQVDNIFGLTNVLTHSERLEKCVQTTSVDNLHFLACGPIPPNPAELLGSKSMQELLAQAYSMYDL
VIFDLPPILAVTDAQIMANVCDASILVVRSESTEKESAVKAKGLLESAKGKLLGVVLNDREREQGLYYYYGAN

Sequences:

>Translated_233_residues
MALNLFKKKKNHRQRRQLIAHQQPKSPISEQYRNIRTNVEFAAVDTNLHSLMVTSANPSEGKTTTTANMAVVFAQQGKKV
LLIDADMRKPAMHQMFQVDNIFGLTNVLTHSERLEKCVQTTSVDNLHFLACGPIPPNPAELLGSKSMQELLAQAYSMYDL
VIFDLPPILAVTDAQIMANVCDASILVVRSESTEKESAVKAKGLLESAKGKLLGVVLNDREREQGLYYYYGAN
>Mature_232_residues
ALNLFKKKKNHRQRRQLIAHQQPKSPISEQYRNIRTNVEFAAVDTNLHSLMVTSANPSEGKTTTTANMAVVFAQQGKKVL
LIDADMRKPAMHQMFQVDNIFGLTNVLTHSERLEKCVQTTSVDNLHFLACGPIPPNPAELLGSKSMQELLAQAYSMYDLV
IFDLPPILAVTDAQIMANVCDASILVVRSESTEKESAVKAKGLLESAKGKLLGVVLNDREREQGLYYYYGAN

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=217, Percent_Identity=37.7880184331797, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI87082032, Length=226, Percent_Identity=35.8407079646018, Blast_Score=138, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 25921; Mature: 25790

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNLFKKKKNHRQRRQLIAHQQPKSPISEQYRNIRTNVEFAAVDTNLHSLMVTSANPSE
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCEEEEEECCCCCC
GKTTTTANMAVVFAQQGKKVLLIDADMRKPAMHQMFQVDNIFGLTNVLTHSERLEKCVQT
CCEEEECCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSVDNLHFLACGPIPPNPAELLGSKSMQELLAQAYSMYDLVIFDLPPILAVTDAQIMANV
CCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHH
CDASILVVRSESTEKESAVKAKGLLESAKGKLLGVVLNDREREQGLYYYYGAN
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCC
>Mature Secondary Structure 
ALNLFKKKKNHRQRRQLIAHQQPKSPISEQYRNIRTNVEFAAVDTNLHSLMVTSANPSE
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCEEEEEECCCCCC
GKTTTTANMAVVFAQQGKKVLLIDADMRKPAMHQMFQVDNIFGLTNVLTHSERLEKCVQT
CCEEEECCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSVDNLHFLACGPIPPNPAELLGSKSMQELLAQAYSMYDLVIFDLPPILAVTDAQIMANV
CCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHH
CDASILVVRSESTEKESAVKAKGLLESAKGKLLGVVLNDREREQGLYYYYGAN
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]