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The map label for this gene is omp19 [H]

Identifier: 49476308

GI number: 49476308

Start: 1916990

End: 1917526

Strand: Reverse

Name: omp19 [H]

Synonym: BH16590

Alternate gene names: 49476308

Gene position: 1917526-1916990 (Counterclockwise)

Preceding gene: 49476314

Following gene: 49476307

Centisome position: 99.3

GC content: 35.94

Gene sequence:

>537_bases
ATGATATTTTCAAAAAAAACATTTTTAATTGTAATATCGATTATAACGTTCTTAACGGGTTGTTCAACATCGCGGTTTGA
GAATAATGATAGAGGTGGTTCTTTAGAGTTTTTTTACCCTGTTCAGTCAATATCAGTTCCTCAAACAATGTCTGATTTAT
CGTCATCTCCTCAGACAACAAATACTTTATTGTATGAAAAAGGAGATTCTCAAAGTGATGGACAAATGGCTAATCTCGAA
TTGCCAGGAAATGCCATTGATTTGTTTCCTGCAAGTATTGCTGGGGTGTGGAATCTTTCTATGGGTGGTAAGGTTTGCCG
AATTGCAACGCCGCAAACAAAATTTGGACAAGGATATCGCGCTGGCCCTTTACATTGTCCAGGAATCTTTTCTCAAGTAA
ATTCTTGGACTGTTAAAGGAAAAAGATTATATTTCTATAATAATTCAGGACGTATTGTTGTTACCCTTTATTCTTCTAAT
GTTGATCGTTTTGAGGGATACACACTTGATGGTTATCCCGTTGTTTTAAGCCGTTAG

Upstream 100 bases:

>100_bases
CTTTTTAATTTATTAATTTATTTTTGTAGAATGCCCTATAAAAACTGTTTACTCATTTCTTTGAGTGAATCTATTTGTTG
TCATGGGAAAGAGCATAGAT

Downstream 100 bases:

>100_bases
ATCATCTTTAGCCATTTATGAAAAAAAACAGATATATTAAGGAAGTCTTGAATTTCATTGATGGCAGTTGAAAAAAGGTT
GTTTGGATGATTTTAGTCTC

Product: Outer membrane lipoprotein

Products: NA

Alternate protein names: 18 kDa immunoreactive antigen; 19 kDa OMP; Minor outer membrane protein omp19 [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIFSKKTFLIVISIITFLTGCSTSRFENNDRGGSLEFFYPVQSISVPQTMSDLSSSPQTTNTLLYEKGDSQSDGQMANLE
LPGNAIDLFPASIAGVWNLSMGGKVCRIATPQTKFGQGYRAGPLHCPGIFSQVNSWTVKGKRLYFYNNSGRIVVTLYSSN
VDRFEGYTLDGYPVVLSR

Sequences:

>Translated_178_residues
MIFSKKTFLIVISIITFLTGCSTSRFENNDRGGSLEFFYPVQSISVPQTMSDLSSSPQTTNTLLYEKGDSQSDGQMANLE
LPGNAIDLFPASIAGVWNLSMGGKVCRIATPQTKFGQGYRAGPLHCPGIFSQVNSWTVKGKRLYFYNNSGRIVVTLYSSN
VDRFEGYTLDGYPVVLSR
>Mature_178_residues
MIFSKKTFLIVISIITFLTGCSTSRFENNDRGGSLEFFYPVQSISVPQTMSDLSSSPQTTNTLLYEKGDSQSDGQMANLE
LPGNAIDLFPASIAGVWNLSMGGKVCRIATPQTKFGQGYRAGPLHCPGIFSQVNSWTVKGKRLYFYNNSGRIVVTLYSSN
VDRFEGYTLDGYPVVLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhizobiaceae omp19 lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003086
- InterPro:   IPR021140
- InterPro:   IPR010571
- InterPro:   IPR016085 [H]

Pfam domain/function: PF02974 Inh [H]

EC number: NA

Molecular weight: Translated: 19595; Mature: 19595

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSKKTFLIVISIITFLTGCSTSRFENNDRGGSLEFFYPVQSISVPQTMSDLSSSPQTT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCC
NTLLYEKGDSQSDGQMANLELPGNAIDLFPASIAGVWNLSMGGKVCRIATPQTKFGQGYR
EEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCC
AGPLHCPGIFSQVNSWTVKGKRLYFYNNSGRIVVTLYSSNVDRFEGYTLDGYPVVLSR
CCCCCCCHHHHHCCCEEECCCEEEEEECCCEEEEEEECCCCCHHCCEEECCEEEEEEC
>Mature Secondary Structure
MIFSKKTFLIVISIITFLTGCSTSRFENNDRGGSLEFFYPVQSISVPQTMSDLSSSPQTT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCC
NTLLYEKGDSQSDGQMANLELPGNAIDLFPASIAGVWNLSMGGKVCRIATPQTKFGQGYR
EEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCC
AGPLHCPGIFSQVNSWTVKGKRLYFYNNSGRIVVTLYSSNVDRFEGYTLDGYPVVLSR
CCCCCCCHHHHHCCCEEECCCEEEEEECCCEEEEEEECCCCCHHCCEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9140920 [H]