| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49476262
Identifier: 49476262
GI number: 49476262
Start: 1858485
End: 1859678
Strand: Reverse
Name: 49476262
Synonym: BH16100
Alternate gene names: NA
Gene position: 1859678-1858485 (Counterclockwise)
Preceding gene: 49476265
Following gene: 49476261
Centisome position: 96.3
GC content: 39.2
Gene sequence:
>1194_bases ATGGCAGATTCTTCAAAATCGAAAGTTAAACCGCATTACACCGGTGTTCGCCGTAAGAAACCTGTGATTGAACAGGATAT TGTAGGCCATAATTCAGAGCAAAAGACACAAAATTCTGTAGAAGCAGATAGAATAGAAGCGGGTAAAGTAGAGAAGCAAA GCATACAGAGTAAATCCATATCAGGTATGATGTGGCTTTACTTATCAATTTCAGGAATTTTCGGTGGTTTTATCGCTTTG GGTATTTTTATGGGTCTTCAGTGGGCAGGTTTGCTTTCGTTTTCTTTACTTAGCAATCCTACTGGAGAGGAAAATGCTTT GCAGATTGCTGAAACTGCAAAAATTCAAAGTGAAGAGACAATAAGGCAATTGAAGTATGCGCTTCAGGAAATCGATAGCT TGAAAGCAGAAATTTCTTCTTTTTCATCACGTCAGCTTGGAACATTTCAAAGTGGTGAAGCATCGCAGGAAGAAAGCAAA AAAGCTTTTACGGCTTTAGAGGAAAAAGTAAGTGGTCTTGAAGAGTATGTGCTCACTCTAGTTGGTATCTCAAAAGATAT GAAAGCTGCTATGTTAATTGGGCAGAGCAATGCAAGTGCTCTTGCGGCTTTACAGCAACGTTTAGAAACTCTGCAGAAAG AAATTACTGTTAAAAGTGATGGGAAGGAAAAAATAAATACGGCGTTGTTTATTGCGATTAATTCGCTGAAGAATGCTGTA GAGCGTGGCGGATCTTATGTCAACGAATTGAAAATATTACAACAATTATCGCCTTCGATTGAGGGGCTTGATTTGTTACA AAAAACAGCCCCTATCGGGTTTCCTAGTTCAGTTCAACTTGCAGCTGATTTTGCCAATATTGCCGATGCAATTGTTGCAA CGCAAAAGATTGTTGCGTCAGATGCTGGTTTTTTTGAACGGATTTTGGCATGGATAAAAGGTTTGATTGTTTCGCGACCG ATTGGAAATGTTGAAGGTATGACATTGGAAGCAATCGCGGCCCGGATGGAAGTTGCTATTCAAACAGGTGATTACGAAAA GGCTTTAAGTGAATGGCAAAAATTGCCTCAAAGTGCAAAAGATGTTTCAGTAAACTTTGTTCACCAACTTGAAAGATATG TTGCTGTTCATAACCTTCTTCAGCAGTTGTTGTTGTCTGCACAACAAGGATCTTTTAAGGCAACAAGCATGTAA
Upstream 100 bases:
>100_bases AGTGTAAAATAATTTATGTTTTTTGAAAAAAGTTTCATTTTTAAAGATTTTTTCATTTTGTTCTTTTATCGTTAAAAAAA GTACCAAAAAAGTGATTAAA
Downstream 100 bases:
>100_bases ATAGGCTAAAAATGATACGTATTTTGATTTATACTTTTGTTGTATGTCTGTTTGGCTTAGCTTTTGAGTGGGTTGCTAAT TACAATGATGTCCTTGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MADSSKSKVKPHYTGVRRKKPVIEQDIVGHNSEQKTQNSVEADRIEAGKVEKQSIQSKSISGMMWLYLSISGIFGGFIAL GIFMGLQWAGLLSFSLLSNPTGEENALQIAETAKIQSEETIRQLKYALQEIDSLKAEISSFSSRQLGTFQSGEASQEESK KAFTALEEKVSGLEEYVLTLVGISKDMKAAMLIGQSNASALAALQQRLETLQKEITVKSDGKEKINTALFIAINSLKNAV ERGGSYVNELKILQQLSPSIEGLDLLQKTAPIGFPSSVQLAADFANIADAIVATQKIVASDAGFFERILAWIKGLIVSRP IGNVEGMTLEAIAARMEVAIQTGDYEKALSEWQKLPQSAKDVSVNFVHQLERYVAVHNLLQQLLLSAQQGSFKATSM
Sequences:
>Translated_397_residues MADSSKSKVKPHYTGVRRKKPVIEQDIVGHNSEQKTQNSVEADRIEAGKVEKQSIQSKSISGMMWLYLSISGIFGGFIAL GIFMGLQWAGLLSFSLLSNPTGEENALQIAETAKIQSEETIRQLKYALQEIDSLKAEISSFSSRQLGTFQSGEASQEESK KAFTALEEKVSGLEEYVLTLVGISKDMKAAMLIGQSNASALAALQQRLETLQKEITVKSDGKEKINTALFIAINSLKNAV ERGGSYVNELKILQQLSPSIEGLDLLQKTAPIGFPSSVQLAADFANIADAIVATQKIVASDAGFFERILAWIKGLIVSRP IGNVEGMTLEAIAARMEVAIQTGDYEKALSEWQKLPQSAKDVSVNFVHQLERYVAVHNLLQQLLLSAQQGSFKATSM >Mature_396_residues ADSSKSKVKPHYTGVRRKKPVIEQDIVGHNSEQKTQNSVEADRIEAGKVEKQSIQSKSISGMMWLYLSISGIFGGFIALG IFMGLQWAGLLSFSLLSNPTGEENALQIAETAKIQSEETIRQLKYALQEIDSLKAEISSFSSRQLGTFQSGEASQEESKK AFTALEEKVSGLEEYVLTLVGISKDMKAAMLIGQSNASALAALQQRLETLQKEITVKSDGKEKINTALFIAINSLKNAVE RGGSYVNELKILQQLSPSIEGLDLLQKTAPIGFPSSVQLAADFANIADAIVATQKIVASDAGFFERILAWIKGLIVSRPI GNVEGMTLEAIAARMEVAIQTGDYEKALSEWQKLPQSAKDVSVNFVHQLERYVAVHNLLQQLLLSAQQGSFKATSM
Specific function: Unknown
COG id: COG4223
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43259; Mature: 43128
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSSKSKVKPHYTGVRRKKPVIEQDIVGHNSEQKTQNSVEADRIEAGKVEKQSIQSKSI CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHH SGMMWLYLSISGIFGGFIALGIFMGLQWAGLLSFSLLSNPTGEENALQIAETAKIQSEET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHH IRQLKYALQEIDSLKAEISSFSSRQLGTFQSGEASQEESKKAFTALEEKVSGLEEYVLTL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGISKDMKAAMLIGQSNASALAALQQRLETLQKEITVKSDGKEKINTALFIAINSLKNAV HHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ERGGSYVNELKILQQLSPSIEGLDLLQKTAPIGFPSSVQLAADFANIADAIVATQKIVAS HHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC DAGFFERILAWIKGLIVSRPIGNVEGMTLEAIAARMEVAIQTGDYEKALSEWQKLPQSAK CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH DVSVNFVHQLERYVAVHNLLQQLLLSAQQGSFKATSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ADSSKSKVKPHYTGVRRKKPVIEQDIVGHNSEQKTQNSVEADRIEAGKVEKQSIQSKSI CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHH SGMMWLYLSISGIFGGFIALGIFMGLQWAGLLSFSLLSNPTGEENALQIAETAKIQSEET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHH IRQLKYALQEIDSLKAEISSFSSRQLGTFQSGEASQEESKKAFTALEEKVSGLEEYVLTL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGISKDMKAAMLIGQSNASALAALQQRLETLQKEITVKSDGKEKINTALFIAINSLKNAV HHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ERGGSYVNELKILQQLSPSIEGLDLLQKTAPIGFPSSVQLAADFANIADAIVATQKIVAS HHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC DAGFFERILAWIKGLIVSRPIGNVEGMTLEAIAARMEVAIQTGDYEKALSEWQKLPQSAK CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH DVSVNFVHQLERYVAVHNLLQQLLLSAQQGSFKATSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA