| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49476261
Identifier: 49476261
GI number: 49476261
Start: 1856920
End: 1858473
Strand: Reverse
Name: 49476261
Synonym: BH16090
Alternate gene names: NA
Gene position: 1858473-1856920 (Counterclockwise)
Preceding gene: 49476262
Following gene: 49476260
Centisome position: 96.24
GC content: 40.35
Gene sequence:
>1554_bases ATGATACGTATTTTGATTTATACTTTTGTTGTATGTCTGTTTGGCTTAGCTTTTGAGTGGGTTGCTAATTACAATGATGT CCTTGTTATAACGTTTTCGCACTTTCGATTTTCCGTTTCATTGTTGACAGCTCTAAGTTTACTCATTTTATTTCTTGGAA TTTTGGCGCTTTTATGGTGGCTTTTTTCTATACTTTTTTCCGTACCTCACATTCTCTCCAATTATTTTTATAAACGTCGT CAAAAGCACGGTTATGAAGCTCTTTCACAGGGCTTTCTTGCAGTTTTTGCTGGCGATGCTATTGTAGCGCAAAAAATGCA GACACGTGTTGAAAAATATCTTGCAGGAAATCGTGAGCCATTGGCTAAGCTTTTACAAGCACAAACTTTATCTTTGCAGA ATAACTCTGCTCGTGCCATTGGTCTTTATGAGCAAATGAGAAAAGAAAAACAGACAAAACTGGCTGGGCTTTACGGTTTA TTTCGTGAAGCTATGAAGACCAATGCGTATGAAGCAGCACAACAATATGCACAAGAAGCACAGGCTTTATCACCAGCACT TTTGTGGGCGCATCAAGCAGTGCTTGATCGCTTGAGCGCAGAGGGGAGCTGGGATAAAGCACTTGATGTTTTTGAACAGG CGCAAAAAGCTTTACCGCGTTCTGTCCGCTTGGCTCCAGAGCGTCAACATTTACAGGCTTTACTGCTCAGTGGGCAGGCT CTTCATCTGTTGAGGACGCATCCTGTAGATGCTTGTAAGGCTATTTTGAAAGCACATAAACTCGTGCCTGATTTTATACC TATAACAGTGATTGCCGCCGATATTCTTTATAAATTAAATGAAACACGCAAAGCTGATAAAATGATTGTTGCTGCTTGGC AAAAAGAACCTCATCCTGATTTGGGAGCTCTTTATCTTGAAAGAGAAGAAGGGGCCGTTGGGCGCTTAAAAAAAGCTAAG ACACTTGCTTCTTATAATAAAGATACATTTGAATCCACTTTTCTTATTGCTAAAGCTGCTCTTGATGCAGGTGAAAGAGT ATTAGCTAGGGAACAGGCACAAAAAGCACTTCAATATCATAAGCGGGAAAGTGTTTATTTGTTGCTAGCAGATATTGAAG AAGCACAGGGTAATAATCAGGCGGCAGTGCGGCAATGGCTTTCTTTGGCGCTGCGTGCTGAACGTGATCCGGTATGGATG TGTGACGGTACTATTTTTTCTTCTTGGGCAGTCATCTCTCCAATAAGTGGACGTTTGGGCTGCTTTGAATGGAAAGCACC TCCCCGTATGCCCCCTCTCACATTGGAGGCTGATACTCTTGTGCTGACAAAAAAAGACCAAGAAGATAAAGAAGATAAGG TGGATAAAAATGCTGTTGTTGAAGGTGAAATGTTAGAAAAGTCTCCTTCTGTAAAAGTTGATCTTTTGCATCATGCACAG ATAGATAAACAAGATACAGAAGAATCTAGTCAAATTCGCTTAAATGTTGATGATCCAGGGGTTAAAATAGAAGAAGATGC GTTTTTGTCGAAAAAGAAATTTCGGTTGTTTTAA
Upstream 100 bases:
>100_bases AACTTGAAAGATATGTTGCTGTTCATAACCTTCTTCAGCAGTTGTTGTTGTCTGCACAACAAGGATCTTTTAAGGCAACA AGCATGTAAATAGGCTAAAA
Downstream 100 bases:
>100_bases AAAAACTATAGTGAATATTCTGTATCGAAATTATTCTCTTATGCTTAAAAAATGAAATTTTACTTAGCTGCAAAAGTGAT TGGTTGAAACATGTTTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: HemY Domain Protein; HemY-Like; HemY Protein; HemY N-Terminal Domain Protein; Signal Peptide; Hypthetical Protein Contains N-Terminal HemY Domain; HemY Domain Membrane Protein
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWWLFSILFSVPHILSNYFYKRR QKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREPLAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGL FREAMKTNAYEAAQQYAQEAQALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPDLGALYLEREEGAVGRLKKAK TLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWM CDGTIFSSWAVISPISGRLGCFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF
Sequences:
>Translated_517_residues MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWWLFSILFSVPHILSNYFYKRR QKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREPLAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGL FREAMKTNAYEAAQQYAQEAQALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPDLGALYLEREEGAVGRLKKAK TLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWM CDGTIFSSWAVISPISGRLGCFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF >Mature_517_residues MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWWLFSILFSVPHILSNYFYKRR QKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREPLAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGL FREAMKTNAYEAAQQYAQEAQALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPDLGALYLEREEGAVGRLKKAK TLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWM CDGTIFSSWAVISPISGRLGCFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF
Specific function: Unknown
COG id: COG3898
COG function: function code S; Uncharacterized membrane-bound protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58445; Mature: 58445
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWW CEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSILFSVPHILSNYFYKRRQKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREP HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEEHCCCHHHHHHHHHHHHHHHCCCHHH LAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGLFREAMKTNAYEAAQQYAQEA HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCH LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPD HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC LGALYLEREEGAVGRLKKAKTLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYH CCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMCDGTIFSSWAVISPISGRLG CCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHCCCCCCCCC CFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ EEECCCCCCCCCEEECCCEEEEECCCCCCHHHHCCCCCCCCCHHHCCCCCCEEEEHHHHH IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF CCCCCCCCCCEEEEEECCCCCEECCHHHHCCHHCCCC >Mature Secondary Structure MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWW CEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSILFSVPHILSNYFYKRRQKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREP HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEEHCCCHHHHHHHHHHHHHHHCCCHHH LAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGLFREAMKTNAYEAAQQYAQEA HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCH LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPD HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC LGALYLEREEGAVGRLKKAKTLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYH CCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMCDGTIFSSWAVISPISGRLG CCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHCCCCCCCCC CFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ EEECCCCCCCCCEEECCCEEEEECCCCCCHHHHCCCCCCCCCHHHCCCCCCEEEEHHHHH IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF CCCCCCCCCCEEEEEECCCCCEECCHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA