| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49476205
Identifier: 49476205
GI number: 49476205
Start: 1795752
End: 1796360
Strand: Reverse
Name: 49476205
Synonym: BH15500
Alternate gene names: NA
Gene position: 1796360-1795752 (Counterclockwise)
Preceding gene: 49476206
Following gene: 49476204
Centisome position: 93.03
GC content: 37.27
Gene sequence:
>609_bases ATGAAAACTTTTTTTTTACTACGGAGGAGAATATTTGCGTTTGTGGGAATTCTTATCTTTAGTTGCTTAACTTTTCCGGC TTTTTCACAATCATCCAATAAAGTGGCGCGGGCGCAGAAAATTGCCAATCACTTTGCAGCGATTAAAACAATGACAGGTG ATTTTATTCAATTTAGTCCAAAAGGAAAAATGTCTCAGGGAACATTTTATTTAGAGCGTCCAGGGAAAATTCGTTTTATT TATAAAAAAATACCCTTACAGATCATTGCAGATGGTCAATTCATAGGAATTAACAATCGCGCTTTGAATACTTGGAATTT CTCAAAACTCTTCCAAACACCTATGAAATTTCTGTTGGACGATAAAATTAATATCTCATCAGGACGTTTATTAGCATTTC GTGAAGATCCTGGGGCGGTGACGATTGTTCTGCGGGATAAAAGTGTTGGCGCAGGGCAAATACGAATGGTTTTTGATTCT AAAACCTATTCTTTACGGCAATGGACAATTGTTGATCAGCAGAACTTAGAAACCACTGTGCAAATTATGAATGTGCGTAC AGGTGTGCGGTTTGCGGATGGGATGTTTACACTTCCCTCTAAGAAATAA
Upstream 100 bases:
>100_bases TTTCAAATAATATCTTTCTCATTTAAAAGAGGATATTTATTCATTATTCGCTGCTTGATTATATTGTAAGGTAAATATCT AGTGTTTGGGAGCATTTTCT
Downstream 100 bases:
>100_bases GAATAGGCTATTATCTTATCGGAATTAAAACAGATGTTCTTTCGTCTTGCTACTTGGAATATTAACTCTATCCGTTTGCG TCTTGCACAGATTTTTCAGT
Product: Outer membrane lipoprotein carrier protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein Carrier Protein; Outer Membrane Lipoproteins Carrier Protein; Twin-Arginine Translocation Pathway Signal; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Lipoprotein-Sorting Protein; LolA Type Protein; Outer-Membrane Lipoproteins Carrier Protein; Signal Peptide; LolA Family Protein; LolA Family Outer Membrane Lipoprotein Carrier Protein; Outer Membrane Lipoprotein Carrier Protein LolA Family
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKTFFLLRRRIFAFVGILIFSCLTFPAFSQSSNKVARAQKIANHFAAIKTMTGDFIQFSPKGKMSQGTFYLERPGKIRFI YKKIPLQIIADGQFIGINNRALNTWNFSKLFQTPMKFLLDDKINISSGRLLAFREDPGAVTIVLRDKSVGAGQIRMVFDS KTYSLRQWTIVDQQNLETTVQIMNVRTGVRFADGMFTLPSKK
Sequences:
>Translated_202_residues MKTFFLLRRRIFAFVGILIFSCLTFPAFSQSSNKVARAQKIANHFAAIKTMTGDFIQFSPKGKMSQGTFYLERPGKIRFI YKKIPLQIIADGQFIGINNRALNTWNFSKLFQTPMKFLLDDKINISSGRLLAFREDPGAVTIVLRDKSVGAGQIRMVFDS KTYSLRQWTIVDQQNLETTVQIMNVRTGVRFADGMFTLPSKK >Mature_202_residues MKTFFLLRRRIFAFVGILIFSCLTFPAFSQSSNKVARAQKIANHFAAIKTMTGDFIQFSPKGKMSQGTFYLERPGKIRFI YKKIPLQIIADGQFIGINNRALNTWNFSKLFQTPMKFLLDDKINISSGRLLAFREDPGAVTIVLRDKSVGAGQIRMVFDS KTYSLRQWTIVDQQNLETTVQIMNVRTGVRFADGMFTLPSKK
Specific function: Unknown
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23052; Mature: 23052
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFFLLRRRIFAFVGILIFSCLTFPAFSQSSNKVARAQKIANHFAAIKTMTGDFIQFSP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC KGKMSQGTFYLERPGKIRFIYKKIPLQIIADGQFIGINNRALNTWNFSKLFQTPMKFLLD CCCCCCCEEEEECCCCEEEEEEECCEEEEECCEEEECCCCEECCCCHHHHHHHHHHHHHC DKINISSGRLLAFREDPGAVTIVLRDKSVGAGQIRMVFDSKTYSLRQWTIVDQQNLETTV CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEE QIMNVRTGVRFADGMFTLPSKK EEEEECCCCEEECCEEECCCCC >Mature Secondary Structure MKTFFLLRRRIFAFVGILIFSCLTFPAFSQSSNKVARAQKIANHFAAIKTMTGDFIQFSP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC KGKMSQGTFYLERPGKIRFIYKKIPLQIIADGQFIGINNRALNTWNFSKLFQTPMKFLLD CCCCCCCEEEEECCCCEEEEEEECCEEEEECCEEEECCCCEECCCCHHHHHHHHHHHHHC DKINISSGRLLAFREDPGAVTIVLRDKSVGAGQIRMVFDSKTYSLRQWTIVDQQNLETTV CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEE QIMNVRTGVRFADGMFTLPSKK EEEEECCCCEEECCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA