| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49476174
Identifier: 49476174
GI number: 49476174
Start: 1743479
End: 1744114
Strand: Reverse
Name: 49476174
Synonym: BH15190
Alternate gene names: NA
Gene position: 1744114-1743479 (Counterclockwise)
Preceding gene: 49476176
Following gene: 49476173
Centisome position: 90.32
GC content: 39.94
Gene sequence:
>636_bases ATGACAACATTTACAATATTGTTAAATGGAGATCTTTTTATCACCGATCGTTTGCGTAATCAAATTCGCAACAGTCGTGT GATTGCCGCTGATGGTGGAATGCGTCATGCAGAAGCTCTCAATGTGGTACCTGAGTTGTGGTTGGGCGATTTCGATTCTT CTCAGCAAGCTTTAAAAAGCAAATATGCAGATATTCCCCGTGAGATTTTTCCCCCTGATAAAGATATGACCGATAGTGCA CTGGCATGTGAAAGAGCTCTCCAAAAGGGGGCTGAAAAGCTTATTTTGTGTGGTGCTTTTGGAGGTGAAAGAAGCGATCA TAGCCTTTCTCATATGACACAAGCACTGGTCATGGAAGAAAAAGGCATTTCAGTGTTATTGACCAGTGGCCGTGAAGAAG GCTGGCCACTTTTGCCAAAGCCTTTTTCATGCGATTTACCTGATGATTCTTTATTTAGTATCATTGGTTTTTCTGATTTA AAAGAATTAACCATATCAGGTGCAAAATGGCCTCTTTATAATAAAAATGTGTTGTTTGGGTCTTCTTTGACACTTTCTAA CCGCATTTGTGGAACCTTCTCTTGTCATTTATGTTCTGGAAAAGCTATAGTGTTGGCATCTGTACCTATTTCATGA
Upstream 100 bases:
>100_bases CTGGGAAAAAGTTTTTAGAAAGGATGCTTTCAACTCTATCACAGTTATTTTTATATAAAGATGATATAAAAAGAAAGCAT TATGAAGGGCATAGTCTGTC
Downstream 100 bases:
>100_bases GTCTCTTCGAGTATATTTGAATAATGCAGAAGGGGGATAAGTAATGAAGTGCCGGCATAATAATATATTTATGTTTTGAT CTTTTTAAGGAGAGGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Thiamine Diphosphokinase; Thiamin Pyrophosphokinase; Thiamin Pyrophosphokinase Catalytic Subunit
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTTFTILLNGDLFITDRLRNQIRNSRVIAADGGMRHAEALNVVPELWLGDFDSSQQALKSKYADIPREIFPPDKDMTDSA LACERALQKGAEKLILCGAFGGERSDHSLSHMTQALVMEEKGISVLLTSGREEGWPLLPKPFSCDLPDDSLFSIIGFSDL KELTISGAKWPLYNKNVLFGSSLTLSNRICGTFSCHLCSGKAIVLASVPIS
Sequences:
>Translated_211_residues MTTFTILLNGDLFITDRLRNQIRNSRVIAADGGMRHAEALNVVPELWLGDFDSSQQALKSKYADIPREIFPPDKDMTDSA LACERALQKGAEKLILCGAFGGERSDHSLSHMTQALVMEEKGISVLLTSGREEGWPLLPKPFSCDLPDDSLFSIIGFSDL KELTISGAKWPLYNKNVLFGSSLTLSNRICGTFSCHLCSGKAIVLASVPIS >Mature_210_residues TTFTILLNGDLFITDRLRNQIRNSRVIAADGGMRHAEALNVVPELWLGDFDSSQQALKSKYADIPREIFPPDKDMTDSAL ACERALQKGAEKLILCGAFGGERSDHSLSHMTQALVMEEKGISVLLTSGREEGWPLLPKPFSCDLPDDSLFSIIGFSDLK ELTISGAKWPLYNKNVLFGSSLTLSNRICGTFSCHLCSGKAIVLASVPIS
Specific function: Unknown
COG id: COG1564
COG function: function code H; Thiamine pyrophosphokinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23064; Mature: 22933
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFTILLNGDLFITDRLRNQIRNSRVIAADGGMRHAEALNVVPELWLGDFDSSQQALKS CEEEEEEECCCEEEEHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHH KYADIPREIFPPDKDMTDSALACERALQKGAEKLILCGAFGGERSDHSLSHMTQALVMEE HHHCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC KGISVLLTSGREEGWPLLPKPFSCDLPDDSLFSIIGFSDLKELTISGAKWPLYNKNVLFG CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCEEEC SSLTLSNRICGTFSCHLCSGKAIVLASVPIS CCEEECCCCCCEEEEEEECCCEEEEEECCCC >Mature Secondary Structure TTFTILLNGDLFITDRLRNQIRNSRVIAADGGMRHAEALNVVPELWLGDFDSSQQALKS EEEEEEECCCEEEEHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHH KYADIPREIFPPDKDMTDSALACERALQKGAEKLILCGAFGGERSDHSLSHMTQALVMEE HHHCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC KGISVLLTSGREEGWPLLPKPFSCDLPDDSLFSIIGFSDLKELTISGAKWPLYNKNVLFG CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCEEEC SSLTLSNRICGTFSCHLCSGKAIVLASVPIS CCEEECCCCCCEEEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA