| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is stfE [C]
Identifier: 49476060
GI number: 49476060
Start: 1604763
End: 1605770
Strand: Reverse
Name: stfE [C]
Synonym: BH13960
Alternate gene names: 49476060
Gene position: 1605770-1604763 (Counterclockwise)
Preceding gene: 49476061
Following gene: 49476059
Centisome position: 83.16
GC content: 42.36
Gene sequence:
>1008_bases ATGAGCTCGATTTATGATTGGTCGCTTACTACATCTGAAAATGCCTATGTTGATGAGAGTATAAACTGGGCAGAAGGACA ACCTCCAAGTTCAGTCAATGATAGTGCGCGGGCGATGATGCAACGCATCAAAGAATATTTATTGGATAATGGTGGGGTGA TTGAGACGCAGTTTATGCTCGATGAGGAGAAGAATAGAACATCTATCCGTTTGATGACAAAGTCTTCTTTTGAGGCTTAT ATGGGTGGGATTGTCGTGCGCTTTAAAGCACAAGGGGTGAATAAGGGAATAACAAATGTTGCTTTAAACCAATTGCTGTC ACGGCCCGTTTATATGGTAAATTCCGATGATGGTATAGTGCCTTTAAAGGGCGGAGAAATTCAAAGGGGCGGGCTTTATG AACTCGTTTACACTTGTGATATTTCTGGAAAAAATGTAGATGGTTGGTTTTTAACCAATCCTACGCTCAGACTTCCTGAA ATCCCCCCCTTGCCCCCTTTGCCAGAAAGTTTTTCACCAGGTTTTATTGGGACTTTTGCTACGGAAAAAATTCCAACAGG TTGGCTTCTTTGCGATGGGAAAGAATATTCTCGCAACGCATATGCAAGCCTCTTTGCTGTTCTTGGTGAAATATGGGGAA AAGGTGATGGGCAAACCACATTTAATGTGCCAGATCTGCGTGGAATGTTTTTGCGGGGGCTGGATAGTGGGAAAGAAATT GATAAAGGACGCTTCTTGGGAAGTAGGCAAGAAGAGTCTTTTAAAGCCCATACCCATGAAGGAAAAACAAACTCCGTCGG CAAACACAAGCATAGTTTTAAAGGGTTTAAAAGCGTAGTTGTACAGCGCAATTTGGATGAGTGGAAAGCTTATGCCTATG GATACGATTCCCAAAATTCTTTAACAGAATTTGAAGGAGAACATGAACATCAGGTCTTTTTGGAAAAAACAGGTGGGGAT GAAACGCGCCCCGTCAATGTGGCTGTTGTTTATGCTATCAAAGTGTGA
Upstream 100 bases:
>100_bases GCCTGAAAATGAAGAAAATATCAGAACCTAAAAAAAGAATTGCTACTTTCTTTTCTGCTCTCTTTGCGCGTTTTCCCTTT TTGCAAAAAGGGTATCTTCT
Downstream 100 bases:
>100_bases AAATTGAAACTCTTTTAGATTTCAATTGTTGCAAGAGCTTTGGTATAAAAGGTGCATTGAAAAATTAAAAATATGTTGTG CACTAAATTTAATGGCAAAC
Product: 35 kDa protein
Products: NA
Alternate protein names: Phage Related Protein; Tail Collar Domain-Containing Protein; Phage Tail Fiber Protein; Phage Tail Collar Domain-Containing Protein; 35 KDa Protein; Bacteriophge Tail Fiber Protein; Phage Tail Collar Domain Family; Phage Variable Tail Fibre Protein; Phage Tail Fiber-Like Protein; Phage Tail Collar Domain Containing Protein; Phage Collar Protein; Tail Fiber-Related Protein; Phage Tail Collar; Phage Tail Collar Protein; Tail Fiber Protein; Phage Tail Protein; Phage Tail Collar Domain Superfamily; Side Tail Fiber Protein Fragment; Tail Fiber Protein GpH
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSSIYDWSLTTSENAYVDESINWAEGQPPSSVNDSARAMMQRIKEYLLDNGGVIETQFMLDEEKNRTSIRLMTKSSFEAY MGGIVVRFKAQGVNKGITNVALNQLLSRPVYMVNSDDGIVPLKGGEIQRGGLYELVYTCDISGKNVDGWFLTNPTLRLPE IPPLPPLPESFSPGFIGTFATEKIPTGWLLCDGKEYSRNAYASLFAVLGEIWGKGDGQTTFNVPDLRGMFLRGLDSGKEI DKGRFLGSRQEESFKAHTHEGKTNSVGKHKHSFKGFKSVVVQRNLDEWKAYAYGYDSQNSLTEFEGEHEHQVFLEKTGGD ETRPVNVAVVYAIKV
Sequences:
>Translated_335_residues MSSIYDWSLTTSENAYVDESINWAEGQPPSSVNDSARAMMQRIKEYLLDNGGVIETQFMLDEEKNRTSIRLMTKSSFEAY MGGIVVRFKAQGVNKGITNVALNQLLSRPVYMVNSDDGIVPLKGGEIQRGGLYELVYTCDISGKNVDGWFLTNPTLRLPE IPPLPPLPESFSPGFIGTFATEKIPTGWLLCDGKEYSRNAYASLFAVLGEIWGKGDGQTTFNVPDLRGMFLRGLDSGKEI DKGRFLGSRQEESFKAHTHEGKTNSVGKHKHSFKGFKSVVVQRNLDEWKAYAYGYDSQNSLTEFEGEHEHQVFLEKTGGD ETRPVNVAVVYAIKV >Mature_334_residues SSIYDWSLTTSENAYVDESINWAEGQPPSSVNDSARAMMQRIKEYLLDNGGVIETQFMLDEEKNRTSIRLMTKSSFEAYM GGIVVRFKAQGVNKGITNVALNQLLSRPVYMVNSDDGIVPLKGGEIQRGGLYELVYTCDISGKNVDGWFLTNPTLRLPEI PPLPPLPESFSPGFIGTFATEKIPTGWLLCDGKEYSRNAYASLFAVLGEIWGKGDGQTTFNVPDLRGMFLRGLDSGKEID KGRFLGSRQEESFKAHTHEGKTNSVGKHKHSFKGFKSVVVQRNLDEWKAYAYGYDSQNSLTEFEGEHEHQVFLEKTGGDE TRPVNVAVVYAIKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37351; Mature: 37220
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIYDWSLTTSENAYVDESINWAEGQPPSSVNDSARAMMQRIKEYLLDNGGVIETQFML CCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE DEEKNRTSIRLMTKSSFEAYMGGIVVRFKAQGVNKGITNVALNQLLSRPVYMVNSDDGIV CCCCCCEEEEEEECCCHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCEE PLKGGEIQRGGLYELVYTCDISGKNVDGWFLTNPTLRLPEIPPLPPLPESFSPGFIGTFA ECCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCEEECH TEKIPTGWLLCDGKEYSRNAYASLFAVLGEIWGKGDGQTTFNVPDLRGMFLRGLDSGKEI HCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCCCC DKGRFLGSRQEESFKAHTHEGKTNSVGKHKHSFKGFKSVVVQRNLDEWKAYAYGYDSQNS CCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCC LTEFEGEHEHQVFLEKTGGDETRPVNVAVVYAIKV HHHCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEC >Mature Secondary Structure SSIYDWSLTTSENAYVDESINWAEGQPPSSVNDSARAMMQRIKEYLLDNGGVIETQFML CCEEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE DEEKNRTSIRLMTKSSFEAYMGGIVVRFKAQGVNKGITNVALNQLLSRPVYMVNSDDGIV CCCCCCEEEEEEECCCHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCEE PLKGGEIQRGGLYELVYTCDISGKNVDGWFLTNPTLRLPEIPPLPPLPESFSPGFIGTFA ECCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCEEECH TEKIPTGWLLCDGKEYSRNAYASLFAVLGEIWGKGDGQTTFNVPDLRGMFLRGLDSGKEI HCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCCCC DKGRFLGSRQEESFKAHTHEGKTNSVGKHKHSFKGFKSVVVQRNLDEWKAYAYGYDSQNS CCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCC LTEFEGEHEHQVFLEKTGGDETRPVNVAVVYAIKV HHHCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA