| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49476061
Identifier: 49476061
GI number: 49476061
Start: 1605767
End: 1606891
Strand: Reverse
Name: 49476061
Synonym: BH13970
Alternate gene names: NA
Gene position: 1606891-1605767 (Counterclockwise)
Preceding gene: 49476062
Following gene: 49476060
Centisome position: 83.21
GC content: 41.33
Gene sequence:
>1125_bases ATGAGTAGAAAAACAAAACCTCAAGTGCAAACAACAACACAAACAAATGCACCACCCGCGTGGGCGGCTGATATCCTTAA AAAAGCAAGTAGCCAAGCACTTGACCTTTATAATAAAGGAATTGGTGGAAATGTTTATCAGGGAGAGCGCATTGCTGGTC TTGGTACTATGACAAAAAATGCTCTTACAGGTTTAGAACAGGCTGTTGGTCAGTATAATAATCCCGCATTGACGCAGTGG TTTAATGCACCAACGCAAAGTGCTCATAATCTTTTGGGTATGGCTAAGGGTGATTGGATTGGAAACAATAGTAAGTTTAA TGCCGCCTTGCAAAGTGCCTTAAGTAAAACTTCCGATGCTATTAATCAATCTATGGCAGGAGCTGGGCGCTATGGTTCTG GTGCACATACCGGGGTGCTTGCCGATGAACTGGGTGCATTGGCAACAAATGCTGCCGCACAGCAATATAATCAAGATATT CATAATATGATGAATGCTAATCAGATGATTGATCGCTCCTTATATGATCAAGTGAATGCAGCAAATAACTACTATCAAGG GCAAAGTAATGCACAAAGCAATGCTTTGAAGGGTGGTCTTATTCAAGATGTTAATCGGCAGAATGCCTTAGATGCTGAGC GCCAAAAATGGACAGAACAAGATAATCAAGCTTGGAACCAATTAGAACGCTTGTTGCGCGTGGGAACGCAAGCTGCTGGA AATTATGGAACAACGTCAGGAAAATCCACAACAATGCCTTCCGTTACAAAAGATCCGTTGCGTGATGCACAGCAAGTGCT TGGATTGATGGGAGGAATTTTAGGACTTTGTGATGTGAGAGCTAAAGAAAATATTGTCCCTGTGGGTGAAAAAAATGGCT ATCCGCTTTATGTCTTTAATTATAAAGGAGATCCGCAGCGCTATTGTGGCGTTCTTGCCCAAGAAGTGTTGCGTTTGAAG CCTGAGGCTGTGTTTGTGAATGCAAAAACAAAATTGTTGCATGTCGATTATAACAAAATCGGCCTGAAAATGAAGAAAAT ATCAGAACCTAAAAAAAGAATTGCTACTTTCTTTTCTGCTCTCTTTGCGCGTTTTCCCTTTTTGCAAAAAGGGTATCTTC TATGA
Upstream 100 bases:
>100_bases CTGAGGAAATACATATGTTTGGAAGATCTGGATGGTCTAAAATGCTTAGCCATCACGGATATTCCCGTAATCTTATTCAT TACAGAAAGGTTCTAAACCC
Downstream 100 bases:
>100_bases GCTCGATTTATGATTGGTCGCTTACTACATCTGAAAATGCCTATGTTGATGAGAGTATAAACTGGGCAGAAGGACAACCT CCAAGTTCAGTCAATGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSRKTKPQVQTTTQTNAPPAWAADILKKASSQALDLYNKGIGGNVYQGERIAGLGTMTKNALTGLEQAVGQYNNPALTQW FNAPTQSAHNLLGMAKGDWIGNNSKFNAALQSALSKTSDAINQSMAGAGRYGSGAHTGVLADELGALATNAAAQQYNQDI HNMMNANQMIDRSLYDQVNAANNYYQGQSNAQSNALKGGLIQDVNRQNALDAERQKWTEQDNQAWNQLERLLRVGTQAAG NYGTTSGKSTTMPSVTKDPLRDAQQVLGLMGGILGLCDVRAKENIVPVGEKNGYPLYVFNYKGDPQRYCGVLAQEVLRLK PEAVFVNAKTKLLHVDYNKIGLKMKKISEPKKRIATFFSALFARFPFLQKGYLL
Sequences:
>Translated_374_residues MSRKTKPQVQTTTQTNAPPAWAADILKKASSQALDLYNKGIGGNVYQGERIAGLGTMTKNALTGLEQAVGQYNNPALTQW FNAPTQSAHNLLGMAKGDWIGNNSKFNAALQSALSKTSDAINQSMAGAGRYGSGAHTGVLADELGALATNAAAQQYNQDI HNMMNANQMIDRSLYDQVNAANNYYQGQSNAQSNALKGGLIQDVNRQNALDAERQKWTEQDNQAWNQLERLLRVGTQAAG NYGTTSGKSTTMPSVTKDPLRDAQQVLGLMGGILGLCDVRAKENIVPVGEKNGYPLYVFNYKGDPQRYCGVLAQEVLRLK PEAVFVNAKTKLLHVDYNKIGLKMKKISEPKKRIATFFSALFARFPFLQKGYLL >Mature_373_residues SRKTKPQVQTTTQTNAPPAWAADILKKASSQALDLYNKGIGGNVYQGERIAGLGTMTKNALTGLEQAVGQYNNPALTQWF NAPTQSAHNLLGMAKGDWIGNNSKFNAALQSALSKTSDAINQSMAGAGRYGSGAHTGVLADELGALATNAAAQQYNQDIH NMMNANQMIDRSLYDQVNAANNYYQGQSNAQSNALKGGLIQDVNRQNALDAERQKWTEQDNQAWNQLERLLRVGTQAAGN YGTTSGKSTTMPSVTKDPLRDAQQVLGLMGGILGLCDVRAKENIVPVGEKNGYPLYVFNYKGDPQRYCGVLAQEVLRLKP EAVFVNAKTKLLHVDYNKIGLKMKKISEPKKRIATFFSALFARFPFLQKGYLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40757; Mature: 40625
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKTKPQVQTTTQTNAPPAWAADILKKASSQALDLYNKGIGGNVYQGERIAGLGTMTKN CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHH ALTGLEQAVGQYNNPALTQWFNAPTQSAHNLLGMAKGDWIGNNSKFNAALQSALSKTSDA HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH INQSMAGAGRYGSGAHTGVLADELGALATNAAAQQYNQDIHNMMNANQMIDRSLYDQVNA HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANNYYQGQSNAQSNALKGGLIQDVNRQNALDAERQKWTEQDNQAWNQLERLLRVGTQAAG CCCCCCCCCCCHHHHHCCCHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NYGTTSGKSTTMPSVTKDPLRDAQQVLGLMGGILGLCDVRAKENIVPVGEKNGYPLYVFN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE YKGDPQRYCGVLAQEVLRLKPEAVFVNAKTKLLHVDYNKIGLKMKKISEPKKRIATFFSA CCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECHHHHCCCHHHHCCHHHHHHHHHHH LFARFPFLQKGYLL HHHHCCHHHCCCCC >Mature Secondary Structure SRKTKPQVQTTTQTNAPPAWAADILKKASSQALDLYNKGIGGNVYQGERIAGLGTMTKN CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHH ALTGLEQAVGQYNNPALTQWFNAPTQSAHNLLGMAKGDWIGNNSKFNAALQSALSKTSDA HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH INQSMAGAGRYGSGAHTGVLADELGALATNAAAQQYNQDIHNMMNANQMIDRSLYDQVNA HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANNYYQGQSNAQSNALKGGLIQDVNRQNALDAERQKWTEQDNQAWNQLERLLRVGTQAAG CCCCCCCCCCCHHHHHCCCHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NYGTTSGKSTTMPSVTKDPLRDAQQVLGLMGGILGLCDVRAKENIVPVGEKNGYPLYVFN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE YKGDPQRYCGVLAQEVLRLKPEAVFVNAKTKLLHVDYNKIGLKMKKISEPKKRIATFFSA CCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECHHHHCCCHHHHCCHHHHHHHHHHH LFARFPFLQKGYLL HHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA