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The map label for this gene is yrbE [H]

Identifier: 49475929

GI number: 49475929

Start: 1346883

End: 1347839

Strand: Reverse

Name: yrbE [H]

Synonym: BH12100

Alternate gene names: 49475929

Gene position: 1347839-1346883 (Counterclockwise)

Preceding gene: 49475930

Following gene: 49475928

Centisome position: 69.8

GC content: 40.75

Gene sequence:

>957_bases
ATGGTGCCACGTATAGCGGTTTTAGGGTGCGGTCATTGGGGTGGAAATCATATACGGACACTCCAAAGTCTTAGAGCTTT
AGCAGCAGTTTCTGATGTTGATAGTGATCGTGCTGCAAGTTTTGCAAGTCTTTATGGCGTTGATGCTGTGGCGCCTGATG
ATCTTTTTACTCGTAGAGATATTGATGCGTTGGTATTAGCTCTGCCTCCACAATTTCATACAGAAAATGTGTTGCGTGCT
GTAAAAAATGGTAAAGATGTTCTCGTTGAAAAACCAATTGCTTTGGATGTTGTTGATGCTGAATGTCAAGTTCAGGCGGC
TAGAGAATACGGACGGATTCTTATGGTGGGCCATATTTTGCGCTTTCATCCTGCTTTTGAAAAAATATCTGAATTAGTGG
AAAATGGAGAACTGGGAGATGTGTGTTATATTTATTCTCATCGATTAGGTTTTGGAAAATTTCATACACAAAGCGATGCT
TTATGGGATCTTGCTCCTCATGATCTTTCAATGATTTTGGCTTTGACAGGATGTGAACCTTCTGAAGTTCGTGGAGAGGG
GGCTGCTGTAATTGATCAGTGTTCTGATTTCGCTCATATTCATATGGCTTTTCCAAATGGTATCCGTAGTCATCTTTTTG
CTTCACGCCTTAGCCCCTATCGTGAAAGGCGTTTAATGGTTGTTGGGACAAAGGCTATGCTCGTTTTTGATGATATGGAA
CCGTGGAGTCGTAAAGTGGCATTTCATCCTTTTGCCGTTTGGAAGGAGAATCAAGAGTGGGCTTTTAGCACTGATGAGCT
GAGTTATATTAATATTTATGAAGATTTACCGCTTACTTGCGAATTAAAGCATTTTCTTCATTGTATTGAAACGCGTCAAT
CGCCTCGTACAAATGGCGATGATGCTCTTGCTATTTTACGGATTTTAACTGCTGCTGGTGTCAATTATCAGAAATAA

Upstream 100 bases:

>100_bases
CAAGCATCGTTTTTAAGCTTTTCTCTTGTCATTCTATTTTATCATCGATATGGAGTATAGAGAAGTATAATTTATATGAT
GAGTAGGGTAAGGCATAAAA

Downstream 100 bases:

>100_bases
AAGAGATTAGTAGCACTTTTATATTTTTGTCATTATCAATGGAGTTAATATGCAATTTATCGACCTTGGGGCGCAGCGTG
CGCGCATTGAAGATAAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MVPRIAVLGCGHWGGNHIRTLQSLRALAAVSDVDSDRAASFASLYGVDAVAPDDLFTRRDIDALVLALPPQFHTENVLRA
VKNGKDVLVEKPIALDVVDAECQVQAAREYGRILMVGHILRFHPAFEKISELVENGELGDVCYIYSHRLGFGKFHTQSDA
LWDLAPHDLSMILALTGCEPSEVRGEGAAVIDQCSDFAHIHMAFPNGIRSHLFASRLSPYRERRLMVVGTKAMLVFDDME
PWSRKVAFHPFAVWKENQEWAFSTDELSYINIYEDLPLTCELKHFLHCIETRQSPRTNGDDALAILRILTAAGVNYQK

Sequences:

>Translated_318_residues
MVPRIAVLGCGHWGGNHIRTLQSLRALAAVSDVDSDRAASFASLYGVDAVAPDDLFTRRDIDALVLALPPQFHTENVLRA
VKNGKDVLVEKPIALDVVDAECQVQAAREYGRILMVGHILRFHPAFEKISELVENGELGDVCYIYSHRLGFGKFHTQSDA
LWDLAPHDLSMILALTGCEPSEVRGEGAAVIDQCSDFAHIHMAFPNGIRSHLFASRLSPYRERRLMVVGTKAMLVFDDME
PWSRKVAFHPFAVWKENQEWAFSTDELSYINIYEDLPLTCELKHFLHCIETRQSPRTNGDDALAILRILTAAGVNYQK
>Mature_318_residues
MVPRIAVLGCGHWGGNHIRTLQSLRALAAVSDVDSDRAASFASLYGVDAVAPDDLFTRRDIDALVLALPPQFHTENVLRA
VKNGKDVLVEKPIALDVVDAECQVQAAREYGRILMVGHILRFHPAFEKISELVENGELGDVCYIYSHRLGFGKFHTQSDA
LWDLAPHDLSMILALTGCEPSEVRGEGAAVIDQCSDFAHIHMAFPNGIRSHLFASRLSPYRERRLMVVGTKAMLVFDDME
PWSRKVAFHPFAVWKENQEWAFSTDELSYINIYEDLPLTCELKHFLHCIETRQSPRTNGDDALAILRILTAAGVNYQK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=251, Percent_Identity=25.0996015936255, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87081947, Length=213, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35583; Mature: 35583

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPRIAVLGCGHWGGNHIRTLQSLRALAAVSDVDSDRAASFASLYGVDAVAPDDLFTRRD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCC
IDALVLALPPQFHTENVLRAVKNGKDVLVEKPIALDVVDAECQVQAAREYGRILMVGHIL
CCEEEEECCCCCCHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHHHHCCCEEEEHHHH
RFHPAFEKISELVENGELGDVCYIYSHRLGFGKFHTQSDALWDLAPHDLSMILALTGCEP
HHCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCEECCCCCCCEEEEEEECCCH
SEVRGEGAAVIDQCSDFAHIHMAFPNGIRSHLFASRLSPYRERRLMVVGTKAMLVFDDME
HHHCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHCCHHHHCEEEEEECEEEEEEECCC
PWSRKVAFHPFAVWKENQEWAFSTDELSYINIYEDLPLTCELKHFLHCIETRQSPRTNGD
CHHHCEEECCEEEEECCCCCEECCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCH
DALAILRILTAAGVNYQK
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVPRIAVLGCGHWGGNHIRTLQSLRALAAVSDVDSDRAASFASLYGVDAVAPDDLFTRRD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCC
IDALVLALPPQFHTENVLRAVKNGKDVLVEKPIALDVVDAECQVQAAREYGRILMVGHIL
CCEEEEECCCCCCHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHHHHCCCEEEEHHHH
RFHPAFEKISELVENGELGDVCYIYSHRLGFGKFHTQSDALWDLAPHDLSMILALTGCEP
HHCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCEECCCCCCCEEEEEEECCCH
SEVRGEGAAVIDQCSDFAHIHMAFPNGIRSHLFASRLSPYRERRLMVVGTKAMLVFDDME
HHHCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHCCHHHHCEEEEEECEEEEEEECCC
PWSRKVAFHPFAVWKENQEWAFSTDELSYINIYEDLPLTCELKHFLHCIETRQSPRTNGD
CHHHCEEECCEEEEECCCCCEECCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCH
DALAILRILTAAGVNYQK
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]