| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475862
Identifier: 49475862
GI number: 49475862
Start: 1249165
End: 1249569
Strand: Reverse
Name: 49475862
Synonym: BH11310
Alternate gene names: NA
Gene position: 1249569-1249165 (Counterclockwise)
Preceding gene: 49475863
Following gene: 49475861
Centisome position: 64.71
GC content: 37.78
Gene sequence:
>405_bases ATGACAGTTTTTCGTACATTTGATATGATTTTAGTCATGATTATGATTTGTATGGCAGGTCTTACTTATAAAGTCAAATA TGATGTCCAAAAACGAATGAGTGAAGTTCGTCGTCTTGAACAAAAAATTGCTGCAGAAAAAAATACGGTGAGTCTGCTTC ATGCTGAGTGGGCTGTAATGATAGAGCCTTCACGCATGCAAAAACTTGCAAAACGTTATCAAAAGGAGCTTGGTTTAGAG AGTATCCAGCCTCGCCAAGTTGTAGAGTTTGAGAGTATTCCAGTACGTGTACATGATCAAATTGAAGAAGTGATTAAACA AAATCTTTTGGAGGAAGGGAAAGATATTTTAGCAAATAATCGTACTTCTCAGGCGAATGGCGTTGTTCGAAAAGGTGTGC GGTGA
Upstream 100 bases:
>100_bases CGAGGTTGCGTATTGGTGTACGTACTGAGGCTGAGTGTCTTTTTGCAGATATGAAATTGTTTGGGTTAGCAAAGATTGCC AGTTTTGAAGGTGGCAAGAA
Downstream 100 bases:
>100_bases TGAAATCATACTTTCTCTTTTCGCAGAAAAGAAAGCGCTTAAAAAAACAGTTCAATATTGATAATTTTCCTGTTCGTCGC TCATATTCTTCTCGTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTVFRTFDMILVMIMICMAGLTYKVKYDVQKRMSEVRRLEQKIAAEKNTVSLLHAEWAVMIEPSRMQKLAKRYQKELGLE SIQPRQVVEFESIPVRVHDQIEEVIKQNLLEEGKDILANNRTSQANGVVRKGVR
Sequences:
>Translated_134_residues MTVFRTFDMILVMIMICMAGLTYKVKYDVQKRMSEVRRLEQKIAAEKNTVSLLHAEWAVMIEPSRMQKLAKRYQKELGLE SIQPRQVVEFESIPVRVHDQIEEVIKQNLLEEGKDILANNRTSQANGVVRKGVR >Mature_133_residues TVFRTFDMILVMIMICMAGLTYKVKYDVQKRMSEVRRLEQKIAAEKNTVSLLHAEWAVMIEPSRMQKLAKRYQKELGLES IQPRQVVEFESIPVRVHDQIEEVIKQNLLEEGKDILANNRTSQANGVVRKGVR
Specific function: Unknown
COG id: COG5462
COG function: function code S; Predicted secreted (periplasmic) protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15590; Mature: 15458
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFRTFDMILVMIMICMAGLTYKVKYDVQKRMSEVRRLEQKIAAEKNTVSLLHAEWAVM CCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEE IEPSRMQKLAKRYQKELGLESIQPRQVVEFESIPVRVHDQIEEVIKQNLLEEGKDILANN ECHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RTSQANGVVRKGVR CCCHHHHHHHCCCC >Mature Secondary Structure TVFRTFDMILVMIMICMAGLTYKVKYDVQKRMSEVRRLEQKIAAEKNTVSLLHAEWAVM CHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEE IEPSRMQKLAKRYQKELGLESIQPRQVVEFESIPVRVHDQIEEVIKQNLLEEGKDILANN ECHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RTSQANGVVRKGVR CCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA