| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is murC
Identifier: 49475854
GI number: 49475854
Start: 1238208
End: 1239635
Strand: Reverse
Name: murC
Synonym: BH11230
Alternate gene names: 49475854
Gene position: 1239635-1238208 (Counterclockwise)
Preceding gene: 49475855
Following gene: 49475853
Centisome position: 64.19
GC content: 39.99
Gene sequence:
>1428_bases ATGAAAATGCCGCTTAATATAGGCCTTATCCATTTTGTCGGAATCGGTGGAATTGGTATGAGTGGAATTGCTGAAGTTTT TCATAATCTTGGTTATAAAGTTCAAGGATCTGATCAAATTGATAACGCTAATGTTAAACGTTTACAGGATAAAGGAATTC AAGTTCATGTAGGGCATCATGCTGAAAATTTAGGAGATGCAGAATTTGTTGTCCTTTCTACTGCTATTAAAAAAACAAAT CCTGAATATATTGCTGCAAAAGAGAGGCATTTACCACTTGTAAAGCGTGCCGAAATGTTGGCAGAGCTGATGCGTTTTCG TCGGGCAATTGCTGTGGGTGGTACTCATGGGAAAACAACAACGACATCAATGATTGCAGCGCTTCTTGATGCCGGGAGTT TTGATCCGATGGTAATTAATGGTGGTATTATCAATGCTTATGGTACGAATGCTCGTATGGGGGAGGGTGATTGGATGGTG GTTGAGGCTGATGAAAGTGATGGTACTTTTTTAAAATTACCTGCTGATATTGCTGTTGTGACCAATATCGATCGTGAGCA TTTAGACCATTATGGGAGTTTTGCTGCTGTGCGTGATGCTTTTCGCCAATTTGTAGAGAATGTTCCTTTTTATGGTTTTG CTGTTTTGTGTATTGATCATCCAGAGGTTCAGTCATTGGCTAGTCGTATTGATGATCGTTGGGTGATTACTTATGGTGCA AATCCACAAGCGGATATTCGTTTTCTTAATCTTTCTATGGATGGTCAAAAAACGTATTTTGATGTCTTTATGCGCTCGCG GAAAACGGGTAGAGAGACTGAATTGAAAAATTTGGTTTTGCCAATGTCTGGGCAGCACAATGTTTCTAATGCAACTGCGG CGATTGCCATTGCTCATGAACTTGGCATTTCAAATGAATCTATCAAAAAGGGCTTAGCAGGATTTGGTGGAGTAAAACGG CGTTTTACGCAAATAGGAAGTTGGCGAGGCGTTGAAATATTCGATGATTATGGACATCATCCTGTCGAAATAAAAGCTGT TTTATGTGCAGCGCGTGAGAGTGCAAAAGGGCGCGTGATAGCTATTGCACAACCCCATCGTTATTCACGTTTGTATCATT TATTTGATGATTTTGCGGCTTGTTTTAATGATGCAGATATAGTGTTGATTGCTCCGGTTTATGCAGCCGGTGAAGAGCCA ATTACTGGTTTTGGTGCTAGGGAATTGGTAGAACATATTCAAATGGCTGGTCATCGTGATGTGCGTTTGATTGATTGTTT GGAAGATGTTGTTTCGATTGTCTCTACTTTTTCTAAATCTGGTGATTATGTTGTTTTTCTTGGTGCTGGCAATATCACAC AATGGGCTTGTGCTTTGCCTAACCAATTGGCGGTATTTGATAACAATGATAAATTTTCAGCTGATTGA
Upstream 100 bases:
>100_bases AAAAAAGTGGGGCAACCTTATGCAACTCGTCGTCTTGCTGATATGGCTGAAGCGTTGATTGTGGGGCGGTCGCTGTCAGA TGTAAAGGAGGAGTTTTTTG
Downstream 100 bases:
>100_bases TGGTGAGGCGCTGTTAGCGCGTTTACAACCGACGTTAGGTGGTATAAAGGGAAAACTTACGCCTAATATGGATATGCAGA AGGTGACGTGGTTTCGCACT
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MKMPLNIGLIHFVGIGGIGMSGIAEVFHNLGYKVQGSDQIDNANVKRLQDKGIQVHVGHHAENLGDAEFVVLSTAIKKTN PEYIAAKERHLPLVKRAEMLAELMRFRRAIAVGGTHGKTTTTSMIAALLDAGSFDPMVINGGIINAYGTNARMGEGDWMV VEADESDGTFLKLPADIAVVTNIDREHLDHYGSFAAVRDAFRQFVENVPFYGFAVLCIDHPEVQSLASRIDDRWVITYGA NPQADIRFLNLSMDGQKTYFDVFMRSRKTGRETELKNLVLPMSGQHNVSNATAAIAIAHELGISNESIKKGLAGFGGVKR RFTQIGSWRGVEIFDDYGHHPVEIKAVLCAARESAKGRVIAIAQPHRYSRLYHLFDDFAACFNDADIVLIAPVYAAGEEP ITGFGARELVEHIQMAGHRDVRLIDCLEDVVSIVSTFSKSGDYVVFLGAGNITQWACALPNQLAVFDNNDKFSAD
Sequences:
>Translated_475_residues MKMPLNIGLIHFVGIGGIGMSGIAEVFHNLGYKVQGSDQIDNANVKRLQDKGIQVHVGHHAENLGDAEFVVLSTAIKKTN PEYIAAKERHLPLVKRAEMLAELMRFRRAIAVGGTHGKTTTTSMIAALLDAGSFDPMVINGGIINAYGTNARMGEGDWMV VEADESDGTFLKLPADIAVVTNIDREHLDHYGSFAAVRDAFRQFVENVPFYGFAVLCIDHPEVQSLASRIDDRWVITYGA NPQADIRFLNLSMDGQKTYFDVFMRSRKTGRETELKNLVLPMSGQHNVSNATAAIAIAHELGISNESIKKGLAGFGGVKR RFTQIGSWRGVEIFDDYGHHPVEIKAVLCAARESAKGRVIAIAQPHRYSRLYHLFDDFAACFNDADIVLIAPVYAAGEEP ITGFGARELVEHIQMAGHRDVRLIDCLEDVVSIVSTFSKSGDYVVFLGAGNITQWACALPNQLAVFDNNDKFSAD >Mature_475_residues MKMPLNIGLIHFVGIGGIGMSGIAEVFHNLGYKVQGSDQIDNANVKRLQDKGIQVHVGHHAENLGDAEFVVLSTAIKKTN PEYIAAKERHLPLVKRAEMLAELMRFRRAIAVGGTHGKTTTTSMIAALLDAGSFDPMVINGGIINAYGTNARMGEGDWMV VEADESDGTFLKLPADIAVVTNIDREHLDHYGSFAAVRDAFRQFVENVPFYGFAVLCIDHPEVQSLASRIDDRWVITYGA NPQADIRFLNLSMDGQKTYFDVFMRSRKTGRETELKNLVLPMSGQHNVSNATAAIAIAHELGISNESIKKGLAGFGGVKR RFTQIGSWRGVEIFDDYGHHPVEIKAVLCAARESAKGRVIAIAQPHRYSRLYHLFDDFAACFNDADIVLIAPVYAAGEEP ITGFGARELVEHIQMAGHRDVRLIDCLEDVVSIVSTFSKSGDYVVFLGAGNITQWACALPNQLAVFDNNDKFSAD
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=461, Percent_Identity=40.997830802603, Blast_Score=305, Evalue=5e-84, Organism=Escherichia coli, GI1790680, Length=464, Percent_Identity=28.2327586206897, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_BARHE (Q6G2Q6)
Other databases:
- EMBL: BX897699 - RefSeq: YP_033895.1 - ProteinModelPortal: Q6G2Q6 - SMR: Q6G2Q6 - GeneID: 2865363 - GenomeReviews: BX897699_GR - KEGG: bhe:BH11230 - NMPDR: fig|283166.1.peg.1023 - HOGENOM: HBG476594 - OMA: EPNFSAV - PhylomeDB: Q6G2Q6 - ProtClustDB: PRK00421 - BioCyc: BHEN283166:BH11230-MONOMER - BRENDA: 6.3.2.8 - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 52079; Mature: 52079
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMPLNIGLIHFVGIGGIGMSGIAEVFHNLGYKVQGSDQIDNANVKRLQDKGIQVHVGHH CCCCCEECEEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCEEEECCC AENLGDAEFVVLSTAIKKTNPEYIAAKERHLPLVKRAEMLAELMRFRRAIAVGGTHGKTT CCCCCCCEEEEEEHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCHH TTSMIAALLDAGSFDPMVINGGIINAYGTNARMGEGDWMVVEADESDGTFLKLPADIAVV HHHHHHHHHCCCCCCCEEEECCEEEECCCCCEECCCCEEEEEECCCCCCEEEECCCEEEE TNIDREHLDHYGSFAAVRDAFRQFVENVPFYGFAVLCIDHPEVQSLASRIDDRWVITYGA ECCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEECC NPQADIRFLNLSMDGQKTYFDVFMRSRKTGRETELKNLVLPMSGQHNVSNATAAIAIAHE CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCCHHEEEEEHHH LGISNESIKKGLAGFGGVKRRFTQIGSWRGVEIFDDYGHHPVEIKAVLCAARESAKGRVI HCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCEEEHEEEEHHHHCCCCCEE AIAQPHRYSRLYHLFDDFAACFNDADIVLIAPVYAAGEEPITGFGARELVEHIQMAGHRD EEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCC VRLIDCLEDVVSIVSTFSKSGDYVVFLGAGNITQWACALPNQLAVFDNNDKFSAD CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKMPLNIGLIHFVGIGGIGMSGIAEVFHNLGYKVQGSDQIDNANVKRLQDKGIQVHVGHH CCCCCEECEEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCEEEECCC AENLGDAEFVVLSTAIKKTNPEYIAAKERHLPLVKRAEMLAELMRFRRAIAVGGTHGKTT CCCCCCCEEEEEEHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCHH TTSMIAALLDAGSFDPMVINGGIINAYGTNARMGEGDWMVVEADESDGTFLKLPADIAVV HHHHHHHHHCCCCCCCEEEECCEEEECCCCCEECCCCEEEEEECCCCCCEEEECCCEEEE TNIDREHLDHYGSFAAVRDAFRQFVENVPFYGFAVLCIDHPEVQSLASRIDDRWVITYGA ECCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEECC NPQADIRFLNLSMDGQKTYFDVFMRSRKTGRETELKNLVLPMSGQHNVSNATAAIAIAHE CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCCHHEEEEEHHH LGISNESIKKGLAGFGGVKRRFTQIGSWRGVEIFDDYGHHPVEIKAVLCAARESAKGRVI HCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCEEEHEEEEHHHHCCCCCEE AIAQPHRYSRLYHLFDDFAACFNDADIVLIAPVYAAGEEPITGFGARELVEHIQMAGHRD EEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCC VRLIDCLEDVVSIVSTFSKSGDYVVFLGAGNITQWACALPNQLAVFDNNDKFSAD CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA