| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is ilvB [H]
Identifier: 49475826
GI number: 49475826
Start: 1200996
End: 1202795
Strand: Reverse
Name: ilvB [H]
Synonym: BH10920
Alternate gene names: 49475826
Gene position: 1202795-1200996 (Counterclockwise)
Preceding gene: 49475827
Following gene: 49475825
Centisome position: 62.29
GC content: 41.28
Gene sequence:
>1800_bases ATGACAAATCATCCAAGAATGCAAGAGAGTGCGAACGGAAAAAAAATGTTGGGCGCTGAAATGGTGGTTCAAGCTCTTAT TGATCAAGGGGTTAAACATCTATTTGGTTATCCTGGTGGGGCTGTCCTTCCTATTTTTGATGTACTTTATCAACAGGATT CACTGCAGCATATTTTGGTGCGTCATGAACAAGCAGCAGGTCATGCTGCTGAAGGTTATGCACGCAGCACAGGGAAGGTC GGCGTTATGCTTGTGACTTCTGGTCCAGGGGCAACGAACGCTGTAACACCTTTGCAAGATGCACTTATGGATTCTATTCC TCTTGTTTGTTTTTCTGGTCAGGTGTCAACAACTGTGATTGGAACAAATGGTTTCCAAGAGGCTGATACAGTTGGTATTA CAAAGTCCTGTACGAAACAAAATTGGTTGGTTAAAGATGTAAATGATCTTGCCGCTATCATTCATGAAGCTTTTGCTGTT GCTCAATCAGGACGTCCAGGGCCAGTTTTGGTTGATATTCCTAAGGATATACAATTAGCTTCAGGTGTTTATAGAGCGCC TCAAGTTTTGGTATCTAGGCATTTTTCTCCACAGTTGGAAAGGAATATTGAGGCTATTGAATGTGCTGTTTCTCTTTTAG AAGAAGCAAAACGTCCTGTTATTTATTCTGGTGGTGGTGTTATTTCATCAGGTCTTCAAGCTGTACAGCTTTTGCGTGAT TTGGTTCAATTGGGAGATTTTCCGATTACTTCAACACTCATGGGACTTGGTGCTTATCCGGCTTCTGGTAAAAATTGGCT TGGAATGCTTGGAATGCATGGAACTTATGAAGCTAATATGGCCATGCATGATTGTGATGTTATGCTGGCTGTTGGGGCAC GGTTTGATGATCGTATCACTGGGCGGCTTGATGCATTTGCACCTCATGCGCGCATTATTCATATTGATGTTGATCCTTCT TCTATCAATAAGATCGTAAAAGTGGAAGTTCCAATTATTGGCGATGTGGCTGATGTTTTAGGAGATATGATGCAATGTTT GCATAGACAGCAACCAATCTTTAAGAGTGAAGGCCGTGATGCGTGGTGGAAGCAAATTGATTGCTGGAGAGCTCGTAATT CATTAGCATACCCTAAGAAAAAAGATATTATTATGCCACAATACGCTCTTGAACGACTTTATGCTCTTACTAAAGATGTG AATGCTTATATTACGACTGATGTTGGGCAGCATCAGATGTGGGCTGCACAATATTATCACTTTGATGAGCCAAACCATTG GATGACTTCTGGTGGTCTTGGAACTATGGGTTATGGTTTGCCTGCTGCTATTGGGGTACAAATCGCACATCCTGATGCAT TTGTTGTATGTATTTCTGGTGATGCTTCAATTCAAATGAATATCCAAGAACTCGCAACGGCAATGCAGTATAACACACCA GTGAAAATTTTTATTTTGAATAATCAGTATATGGGTATGGTCCGCCAGTGGCAGCAGTTGTTGCATGGTAATCGTCTTTC TCATTCTTACACCGAATCAATGCCTGACTTTGTGAAATTGGCACAAGCTTATGGAGGGATTGGTATTCATTGTTCCAAAC CGGATGAACTTGATGATAAAATACAGCAAATGATTGACTGTGACAAACCAGTTCTCTTCGATTGCCGGGTTGATAATTTA GAAAATTGTTTTCCAATGATCCCATCTGGGTGTGCACATAATGATATGCTATTACCTGACGAGGCTCATGATGAAGCAGT TGCCAATGCTATTTCCGCTGAAGGACAATGTTTGGTTTAA
Upstream 100 bases:
>100_bases ACAATCTATGTTTTGTGTGTAGTAGGCTCTCTAAGAGCCTTTTTTTATGGGCTCTTCTGGGGTCTTTTTTTATTGTGCTA TCAAGTAGACGAGTGGGAAA
Downstream 100 bases:
>100_bases GGAGTTTGCAATTACGATAACACGGATTTAAACTTTTGCTTTAGTGACTTTTTTTACTTTGAATATGATTCAACAGAAGC TCAATATGTAGGTTGTTTTA
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MTNHPRMQESANGKKMLGAEMVVQALIDQGVKHLFGYPGGAVLPIFDVLYQQDSLQHILVRHEQAAGHAAEGYARSTGKV GVMLVTSGPGATNAVTPLQDALMDSIPLVCFSGQVSTTVIGTNGFQEADTVGITKSCTKQNWLVKDVNDLAAIIHEAFAV AQSGRPGPVLVDIPKDIQLASGVYRAPQVLVSRHFSPQLERNIEAIECAVSLLEEAKRPVIYSGGGVISSGLQAVQLLRD LVQLGDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMAMHDCDVMLAVGARFDDRITGRLDAFAPHARIIHIDVDPS SINKIVKVEVPIIGDVADVLGDMMQCLHRQQPIFKSEGRDAWWKQIDCWRARNSLAYPKKKDIIMPQYALERLYALTKDV NAYITTDVGQHQMWAAQYYHFDEPNHWMTSGGLGTMGYGLPAAIGVQIAHPDAFVVCISGDASIQMNIQELATAMQYNTP VKIFILNNQYMGMVRQWQQLLHGNRLSHSYTESMPDFVKLAQAYGGIGIHCSKPDELDDKIQQMIDCDKPVLFDCRVDNL ENCFPMIPSGCAHNDMLLPDEAHDEAVANAISAEGQCLV
Sequences:
>Translated_599_residues MTNHPRMQESANGKKMLGAEMVVQALIDQGVKHLFGYPGGAVLPIFDVLYQQDSLQHILVRHEQAAGHAAEGYARSTGKV GVMLVTSGPGATNAVTPLQDALMDSIPLVCFSGQVSTTVIGTNGFQEADTVGITKSCTKQNWLVKDVNDLAAIIHEAFAV AQSGRPGPVLVDIPKDIQLASGVYRAPQVLVSRHFSPQLERNIEAIECAVSLLEEAKRPVIYSGGGVISSGLQAVQLLRD LVQLGDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMAMHDCDVMLAVGARFDDRITGRLDAFAPHARIIHIDVDPS SINKIVKVEVPIIGDVADVLGDMMQCLHRQQPIFKSEGRDAWWKQIDCWRARNSLAYPKKKDIIMPQYALERLYALTKDV NAYITTDVGQHQMWAAQYYHFDEPNHWMTSGGLGTMGYGLPAAIGVQIAHPDAFVVCISGDASIQMNIQELATAMQYNTP VKIFILNNQYMGMVRQWQQLLHGNRLSHSYTESMPDFVKLAQAYGGIGIHCSKPDELDDKIQQMIDCDKPVLFDCRVDNL ENCFPMIPSGCAHNDMLLPDEAHDEAVANAISAEGQCLV >Mature_598_residues TNHPRMQESANGKKMLGAEMVVQALIDQGVKHLFGYPGGAVLPIFDVLYQQDSLQHILVRHEQAAGHAAEGYARSTGKVG VMLVTSGPGATNAVTPLQDALMDSIPLVCFSGQVSTTVIGTNGFQEADTVGITKSCTKQNWLVKDVNDLAAIIHEAFAVA QSGRPGPVLVDIPKDIQLASGVYRAPQVLVSRHFSPQLERNIEAIECAVSLLEEAKRPVIYSGGGVISSGLQAVQLLRDL VQLGDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMAMHDCDVMLAVGARFDDRITGRLDAFAPHARIIHIDVDPSS INKIVKVEVPIIGDVADVLGDMMQCLHRQQPIFKSEGRDAWWKQIDCWRARNSLAYPKKKDIIMPQYALERLYALTKDVN AYITTDVGQHQMWAAQYYHFDEPNHWMTSGGLGTMGYGLPAAIGVQIAHPDAFVVCISGDASIQMNIQELATAMQYNTPV KIFILNNQYMGMVRQWQQLLHGNRLSHSYTESMPDFVKLAQAYGGIGIHCSKPDELDDKIQQMIDCDKPVLFDCRVDNLE NCFPMIPSGCAHNDMLLPDEAHDEAVANAISAEGQCLV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=572, Percent_Identity=26.2237762237762, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI21361361, Length=572, Percent_Identity=25.3496503496504, Blast_Score=147, Evalue=3e-35, Organism=Escherichia coli, GI87081685, Length=569, Percent_Identity=51.6695957820738, Blast_Score=592, Evalue=1e-170, Organism=Escherichia coli, GI1790104, Length=571, Percent_Identity=41.8563922942207, Blast_Score=456, Evalue=1e-129, Organism=Escherichia coli, GI1786717, Length=566, Percent_Identity=32.6855123674912, Blast_Score=293, Evalue=3e-80, Organism=Escherichia coli, GI1787096, Length=555, Percent_Identity=25.7657657657658, Blast_Score=165, Evalue=8e-42, Organism=Escherichia coli, GI1788716, Length=559, Percent_Identity=25.9391771019678, Blast_Score=149, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17531299, Length=583, Percent_Identity=25.9005145797599, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17531301, Length=585, Percent_Identity=25.982905982906, Blast_Score=152, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17542570, Length=546, Percent_Identity=26.1904761904762, Blast_Score=123, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6323755, Length=601, Percent_Identity=44.2595673876872, Blast_Score=500, Evalue=1e-142, Organism=Saccharomyces cerevisiae, GI6320816, Length=482, Percent_Identity=23.8589211618257, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI19922626, Length=570, Percent_Identity=25.2631578947368, Blast_Score=148, Evalue=1e-35,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 65527; Mature: 65396
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNHPRMQESANGKKMLGAEMVVQALIDQGVKHLFGYPGGAVLPIFDVLYQQDSLQHILV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH RHEQAAGHAAEGYARSTGKVGVMLVTSGPGATNAVTPLQDALMDSIPLVCFSGQVSTTVI HHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCEEEEEE GTNGFQEADTVGITKSCTKQNWLVKDVNDLAAIIHEAFAVAQSGRPGPVLVDIPKDIQLA ECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHH SGVYRAPQVLVSRHFSPQLERNIEAIECAVSLLEEAKRPVIYSGGGVISSGLQAVQLLRD CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH LVQLGDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMAMHDCDVMLAVGARFDDRIT HHHHCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEECCCEEECCCEEEEECCCCCCCCC GRLDAFAPHARIIHIDVDPSSINKIVKVEVPIIGDVADVLGDMMQCLHRQQPIFKSEGRD CCHHCCCCCEEEEEEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCCC AWWKQIDCWRARNSLAYPKKKDIIMPQYALERLYALTKDVNAYITTDVGQHQMWAAQYYH HHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHEE FDEPNHWMTSGGLGTMGYGLPAAIGVQIAHPDAFVVCISGDASIQMNIQELATAMQYNTP CCCCCCEEECCCCCCCCCCCCHHHEEEEECCCEEEEEECCCCEEEEEHHHHHHHHHCCCC VKIFILNNQYMGMVRQWQQLLHGNRLSHSYTESMPDFVKLAQAYGGIGIHCSKPDELDDK EEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCEEECCCCCHHHHH IQQMIDCDKPVLFDCRVDNLENCFPMIPSGCAHNDMLLPDEAHDEAVANAISAEGQCLV HHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TNHPRMQESANGKKMLGAEMVVQALIDQGVKHLFGYPGGAVLPIFDVLYQQDSLQHILV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH RHEQAAGHAAEGYARSTGKVGVMLVTSGPGATNAVTPLQDALMDSIPLVCFSGQVSTTVI HHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCEEEEEE GTNGFQEADTVGITKSCTKQNWLVKDVNDLAAIIHEAFAVAQSGRPGPVLVDIPKDIQLA ECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHH SGVYRAPQVLVSRHFSPQLERNIEAIECAVSLLEEAKRPVIYSGGGVISSGLQAVQLLRD CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH LVQLGDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMAMHDCDVMLAVGARFDDRIT HHHHCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEECCCEEECCCEEEEECCCCCCCCC GRLDAFAPHARIIHIDVDPSSINKIVKVEVPIIGDVADVLGDMMQCLHRQQPIFKSEGRD CCHHCCCCCEEEEEEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCCC AWWKQIDCWRARNSLAYPKKKDIIMPQYALERLYALTKDVNAYITTDVGQHQMWAAQYYH HHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHEE FDEPNHWMTSGGLGTMGYGLPAAIGVQIAHPDAFVVCISGDASIQMNIQELATAMQYNTP CCCCCCEEECCCCCCCCCCCCHHHEEEEECCCEEEEEECCCCEEEEEHHHHHHHHHCCCC VKIFILNNQYMGMVRQWQQLLHGNRLSHSYTESMPDFVKLAQAYGGIGIHCSKPDELDDK EEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCEEECCCCCHHHHH IQQMIDCDKPVLFDCRVDNLENCFPMIPSGCAHNDMLLPDEAHDEAVANAISAEGQCLV HHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]