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The map label for this gene is yrrC [H]

Identifier: 49475825

GI number: 49475825

Start: 1199465

End: 1200586

Strand: Reverse

Name: yrrC [H]

Synonym: BH10910

Alternate gene names: 49475825

Gene position: 1200586-1199465 (Counterclockwise)

Preceding gene: 49475826

Following gene: 49475824

Centisome position: 62.17

GC content: 42.78

Gene sequence:

>1122_bases
ATGCAGTTTTCACCGGAACAGGATAATGCATTGAAGGCTGTCTCTGCGTGGTTGAAGGAGGGGCGTTCTCCACTTTTTCG
TCTCTTTGGCTATGCAGGAACAGGGAAGACGACACTTGCTCGTTATTTTGCAGAAACGGTTGATGGCTCTGTCCAATTTA
CTGCGTTCACAGGTAAGGCGGCTCAGGTTTTGCGTTCTAAAGGTGCAAGCAATGCTTGTACTATTCATTCACTGATTTAT
TGCCCGCGTGGGGAGGAAGAAGTTTCCGATGAAGTCACCGGAAAAAAGTCTATTGCACCGACATTTGCATTAAATCGAAG
AAGTGCGGCTGCACAAGCGAAGCTCATTATTGTTGATGAGTGTTCGATGGTAGATGAACAATTAGCCCGTGATTTAATGA
GTTTTCGGACACCAATTCTTGTTCTTGGTGATCCAGGTCAGTTGCCTCCTATCTCAGGAGGCGGTTTTTTTTCCAATGGT
GTACCAGATTTTCTTCTCTCAGAAATTCATCGACAAGCGCGGGATAATCCTATCGTTCGTTTAGCTATGGACGTGCGTGA
AGGACGTGATATTCCTTATGGTAATTACGGAGCAGCTCGCGTTGTTACACGCAAAGAGGTTCATCAGCAATTGGTTTTGG
ATGCTGATCAGCTTTTGGTGGGGATTAACCGAACACGTTACCTTTATAATAAACGTTTGCGTGTATTGAAGGGCTTTACG
GCAGCTTATCCACAAGCAGGAGACAAGCTTGTGTGTTTGCGCAATGATCCGGCGAAAGGCTTGTTAAATGGCTCTTTATG
GAAAGTAATGACTTCACAGAAGGAAACTGTTAAACCCGGTGTTAATCTTCTTGTTAAGCCAGAAGAGAGTGAGCGTGGAG
TAGTGAAGATTAAGCTTTTAAAAGCATTGTTTGAAAATCCTGATAGTGATATTTCATGGCAATTAAAAAAAAGATATGAT
GATTTTGATTATGGATATGCATTAACTGTTCATAAAGCACAAGGGTCTCAATGGAATAATGTTGTTTTATTTGATGAAAG
TTTTGCATTTCGTGATATGTCTGCGCGCTGGCTTTATACCGGGATTACTCGTGCGGCAGAGCGTTTAACCATTGTTCGAT
AG

Upstream 100 bases:

>100_bases
AATTCCTAATGACAAAGATTTTTTGGGGAGTAGGATTTTTCTTAATAGTGGGGGGTGTTAAGTGCTTGCTCTTTTTATAC
GAATCTTATTTTGATAAATT

Downstream 100 bases:

>100_bases
AGAAAATTATTTTTATTATCTGGGCTTATGCTGTGAAATGTATTTTTTTCTATCTTTTAATTATGTATGCAAATGGGAAT
ATGTATGGCAGTAAAACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MQFSPEQDNALKAVSAWLKEGRSPLFRLFGYAGTGKTTLARYFAETVDGSVQFTAFTGKAAQVLRSKGASNACTIHSLIY
CPRGEEEVSDEVTGKKSIAPTFALNRRSAAAQAKLIIVDECSMVDEQLARDLMSFRTPILVLGDPGQLPPISGGGFFSNG
VPDFLLSEIHRQARDNPIVRLAMDVREGRDIPYGNYGAARVVTRKEVHQQLVLDADQLLVGINRTRYLYNKRLRVLKGFT
AAYPQAGDKLVCLRNDPAKGLLNGSLWKVMTSQKETVKPGVNLLVKPEESERGVVKIKLLKALFENPDSDISWQLKKRYD
DFDYGYALTVHKAQGSQWNNVVLFDESFAFRDMSARWLYTGITRAAERLTIVR

Sequences:

>Translated_373_residues
MQFSPEQDNALKAVSAWLKEGRSPLFRLFGYAGTGKTTLARYFAETVDGSVQFTAFTGKAAQVLRSKGASNACTIHSLIY
CPRGEEEVSDEVTGKKSIAPTFALNRRSAAAQAKLIIVDECSMVDEQLARDLMSFRTPILVLGDPGQLPPISGGGFFSNG
VPDFLLSEIHRQARDNPIVRLAMDVREGRDIPYGNYGAARVVTRKEVHQQLVLDADQLLVGINRTRYLYNKRLRVLKGFT
AAYPQAGDKLVCLRNDPAKGLLNGSLWKVMTSQKETVKPGVNLLVKPEESERGVVKIKLLKALFENPDSDISWQLKKRYD
DFDYGYALTVHKAQGSQWNNVVLFDESFAFRDMSARWLYTGITRAAERLTIVR
>Mature_373_residues
MQFSPEQDNALKAVSAWLKEGRSPLFRLFGYAGTGKTTLARYFAETVDGSVQFTAFTGKAAQVLRSKGASNACTIHSLIY
CPRGEEEVSDEVTGKKSIAPTFALNRRSAAAQAKLIIVDECSMVDEQLARDLMSFRTPILVLGDPGQLPPISGGGFFSNG
VPDFLLSEIHRQARDNPIVRLAMDVREGRDIPYGNYGAARVVTRKEVHQQLVLDADQLLVGINRTRYLYNKRLRVLKGFT
AAYPQAGDKLVCLRNDPAKGLLNGSLWKVMTSQKETVKPGVNLLVKPEESERGVVKIKLLKALFENPDSDISWQLKKRYD
DFDYGYALTVHKAQGSQWNNVVLFDESFAFRDMSARWLYTGITRAAERLTIVR

Specific function: Exhibits Several Catalytic Activities, Including ATP-Dependent Exonuclease, ATP-Stimulated Endonuclease, ATP-Dependent Unwinding And DNA-Dependent ATPase Activities. Strand Cleavage Occurs 5' To 3' During The Unwinding Of Duplex DNA At Chi Sequences, Whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 41589; Mature: 41589

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFSPEQDNALKAVSAWLKEGRSPLFRLFGYAGTGKTTLARYFAETVDGSVQFTAFTGKA
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCHH
AQVLRSKGASNACTIHSLIYCPRGEEEVSDEVTGKKSIAPTFALNRRSAAAQAKLIIVDE
HHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCHHEECCCCHHCEEEEEEEEC
CSMVDEQLARDLMSFRTPILVLGDPGQLPPISGGGFFSNGVPDFLLSEIHRQARDNPIVR
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
LAMDVREGRDIPYGNYGAARVVTRKEVHQQLVLDADQLLVGINRTRYLYNKRLRVLKGFT
EEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHEECCHHHHHHHHHHHHHHHHH
AAYPQAGDKLVCLRNDPAKGLLNGSLWKVMTSQKETVKPGVNLLVKPEESERGVVKIKLL
HCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHCCCCCCEEECCCCCCCCEEEHHHH
KALFENPDSDISWQLKKRYDDFDYGYALTVHKAQGSQWNNVVLFDESFAFRDMSARWLYT
HHHHCCCCCCCEEHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHH
GITRAAERLTIVR
HHHHHHHHHEECC
>Mature Secondary Structure
MQFSPEQDNALKAVSAWLKEGRSPLFRLFGYAGTGKTTLARYFAETVDGSVQFTAFTGKA
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCHH
AQVLRSKGASNACTIHSLIYCPRGEEEVSDEVTGKKSIAPTFALNRRSAAAQAKLIIVDE
HHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCHHEECCCCHHCEEEEEEEEC
CSMVDEQLARDLMSFRTPILVLGDPGQLPPISGGGFFSNGVPDFLLSEIHRQARDNPIVR
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
LAMDVREGRDIPYGNYGAARVVTRKEVHQQLVLDADQLLVGINRTRYLYNKRLRVLKGFT
EEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHEECCHHHHHHHHHHHHHHHHH
AAYPQAGDKLVCLRNDPAKGLLNGSLWKVMTSQKETVKPGVNLLVKPEESERGVVKIKLL
HCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHCCCCCCEEECCCCCCCCEEEHHHH
KALFENPDSDISWQLKKRYDDFDYGYALTVHKAQGSQWNNVVLFDESFAFRDMSARWLYT
HHHHCCCCCCCEEHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHH
GITRAAERLTIVR
HHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: DNA-dependent ATPase activity; Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]