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The map label for this gene is secY [H]

Identifier: 49475774

GI number: 49475774

Start: 1145570

End: 1146916

Strand: Reverse

Name: secY [H]

Synonym: BH10310

Alternate gene names: 49475774

Gene position: 1146916-1145570 (Counterclockwise)

Preceding gene: 49475775

Following gene: 49475773

Centisome position: 59.39

GC content: 38.46

Gene sequence:

>1347_bases
ATGGCATCAGCAGCAGAGCAATTTGCTTCCAATATAAACTTCGGTACTTTTTCGCGTGCGACCGAGTTAAAGAAGCGCAT
TTGGTTTACCTTGGGAGCGCTTCTTGTGTATCGTTTTGGTACATATATTTCTCTTCCTGGTATTAATATTGATGCTTTAC
GGCAAACATTTGAACATCATGCTTCTGGCGTTTTGGGTTTATTTAATATGTTTGCTGGAGGTGCTGTTGGGCGCATGGCA
ATTTTTGCACTGGGAATTATGCCTTATATATCGGCGTCAATTATTGTGCAATTGCTCACCTCCATTATTCCTTCTTTGGA
AACTCTTAAAAAAGAGGGGGAATTAGGTCGTAAAATTATTAATCAGTATACCCGTTATGTAACAGTGGTATTGGCAATTT
TACAGGCGTTTGGTATTGCGGTTGCTCTTGAAACGGGTATAGGAACAGGTCTTCAAATTGTTTTAGAACCCGGTTTTATG
TTCCGTATTTCTTCCGTTATTACCCTTGTTGGTGGGACAATGTTTCTCATGTGGCTTGGCGAACAAATTACATCACGTGG
TGTTGGTAATGGGGTTTCTCTTATTATTTTTACAGGTATTGTGGCTAATCTCCCTTCTACTTTTGCTCAACTCTTGACTG
CTCATAGTCAAGCTGATTTATCAACTTTTTTGTTCATAACAATCATTTTTATTGCGGTTTCTGTCATCGCAATTATTGTT
TTTGTTGAGCGAGCACAACGACGTATCCTTATTCAGTATCCGAAACGTCAGGTTGGTAACCAGATGTTTCAAGGTGATAT
GTCACATCTTCCTTTAAAGCTGAATACTGCTGGTGTTATTCCACCGATTTTTGCTTCCTCTTTGTTGTTATTACCTGCAA
CTGTTAATAATTTTTCTGATAAAATGCCACAATGGGTTCAAGCTATTTCTTATTCTCTTGGTCACGGACAGCCACTTTAT
ATGATTGTCTATGCCATTTTGATGGCATTTTTTTGCTTTTTTTATACAGCTATTGTGTTTAATCCAAGTGATACAGCAGA
TCAATTAAAGAAACATTCTGGCTTTATTCCAGGAATTCGTCCTGGCGAGCGTACAGCTGAGTATATTGATTATGTTTTGA
CGCGTATTACTGTTGTGGGAGCTATTTATATTATTTTGGTTTGTTTGTTGCCGGAATTTATGATATCCGCACTACAGGTT
CCTTTTTATCTTGGAGGGACGTCTTTGTTGATTGTTGTTACTGTTACGCTTGATACAGTTGCCCAAATTCAGGGACATCT
TGTGGCACACCAATATGAAGGATTGATTAAAAAGTCAAAACTTCGTGGAGGCAGAAGGAATCGATGA

Upstream 100 bases:

>100_bases
GAATTGTTTAGGTTTTACATTTATTATATTATAAAGGTATGAGTTTTTAGAATTATACTTCTGTGATTTAAAGAACTGGA
GTGTGGACGGGAGACGTTTT

Downstream 100 bases:

>100_bases
GGATTGTTCTTTTAGGTCCTCCTGGAGCTGGAAAAGGTACACAAGCTAAGATGTTGTGTGAGGAATATCACATCCCTCAG
TTATCAACAGGCGATATGTT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MASAAEQFASNINFGTFSRATELKKRIWFTLGALLVYRFGTYISLPGINIDALRQTFEHHASGVLGLFNMFAGGAVGRMA
IFALGIMPYISASIIVQLLTSIIPSLETLKKEGELGRKIINQYTRYVTVVLAILQAFGIAVALETGIGTGLQIVLEPGFM
FRISSVITLVGGTMFLMWLGEQITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLFITIIFIAVSVIAIIV
FVERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSDKMPQWVQAISYSLGHGQPLY
MIVYAILMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPGERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISALQV
PFYLGGTSLLIVVTVTLDTVAQIQGHLVAHQYEGLIKKSKLRGGRRNR

Sequences:

>Translated_448_residues
MASAAEQFASNINFGTFSRATELKKRIWFTLGALLVYRFGTYISLPGINIDALRQTFEHHASGVLGLFNMFAGGAVGRMA
IFALGIMPYISASIIVQLLTSIIPSLETLKKEGELGRKIINQYTRYVTVVLAILQAFGIAVALETGIGTGLQIVLEPGFM
FRISSVITLVGGTMFLMWLGEQITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLFITIIFIAVSVIAIIV
FVERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSDKMPQWVQAISYSLGHGQPLY
MIVYAILMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPGERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISALQV
PFYLGGTSLLIVVTVTLDTVAQIQGHLVAHQYEGLIKKSKLRGGRRNR
>Mature_447_residues
ASAAEQFASNINFGTFSRATELKKRIWFTLGALLVYRFGTYISLPGINIDALRQTFEHHASGVLGLFNMFAGGAVGRMAI
FALGIMPYISASIIVQLLTSIIPSLETLKKEGELGRKIINQYTRYVTVVLAILQAFGIAVALETGIGTGLQIVLEPGFMF
RISSVITLVGGTMFLMWLGEQITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLFITIIFIAVSVIAIIVF
VERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSDKMPQWVQAISYSLGHGQPLYM
IVYAILMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPGERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISALQVP
FYLGGTSLLIVVTVTLDTVAQIQGHLVAHQYEGLIKKSKLRGGRRNR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=425, Percent_Identity=53.8823529411765, Blast_Score=432, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49160; Mature: 49029

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAAEQFASNINFGTFSRATELKKRIWFTLGALLVYRFGTYISLPGINIDALRQTFEHH
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
ASGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLETLKKEGELGRKII
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQYTRYVTVVLAILQAFGIAVALETGIGTGLQIVLEPGFMFRISSVITLVGGTMFLMWLG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
EQITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLFITIIFIAVSVIAIIV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
FVERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSD
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH
KMPQWVQAISYSLGHGQPLYMIVYAILMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC
PGERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISALQVPFYLGGTSLLIVVTVTLDTV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEHHHHHHH
AQIQGHLVAHQYEGLIKKSKLRGGRRNR
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASAAEQFASNINFGTFSRATELKKRIWFTLGALLVYRFGTYISLPGINIDALRQTFEHH
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
ASGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLETLKKEGELGRKII
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQYTRYVTVVLAILQAFGIAVALETGIGTGLQIVLEPGFMFRISSVITLVGGTMFLMWLG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
EQITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLFITIIFIAVSVIAIIV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
FVERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSD
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH
KMPQWVQAISYSLGHGQPLYMIVYAILMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC
PGERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISALQVPFYLGGTSLLIVVTVTLDTV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEHHHHHHH
AQIQGHLVAHQYEGLIKKSKLRGGRRNR
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA