| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is ygcG [H]
Identifier: 49475556
GI number: 49475556
Start: 893801
End: 894652
Strand: Reverse
Name: ygcG [H]
Synonym: BH07860
Alternate gene names: 49475556
Gene position: 894652-893801 (Counterclockwise)
Preceding gene: 49475557
Following gene: 49475555
Centisome position: 46.33
GC content: 36.03
Gene sequence:
>852_bases ATGAAATTCTTTCAATATTTTATGCAACGTAGTGTTTTTCAATATTTATTGGCTTTTATTGGATTTCTGTATTTGCTTAC GGTATTGGGAGGGGGAGCTTGTTCGCAAATCAAGTTTCCTCCCTTAACTGGCTATGTTAACGATGTAGCTCATTTGCTCG ATAATGCAACAAAGCAGAATTTAACAGAAAAATTGGCTGAACTCGAAGAGAAAACTGGAGATCAAATTGCTATTGTAACT CTTCCTACCCTTTCAGGGAACGATATAGAAACATATAGCAATTCTCTTTTCCGTAAATGGGGATTAGGTCAAAAACAGAT CAATAATGGTGTATTACTTGTCATTGCACCGAATGAACGTGAAATGCGTATTGAAGTTGGCTACGGTTTGGAAGGAGTGC TAACAGACGCTCTTTCCGCAGTTATTATTAATAGCTTTGTTCTTCCTAATTTTCGTGAAGGCAATTATCAAAAAGGAATC GTTGAAGCAGTTCATGCAATTATCAACGTTATTACAGAAAGTGATTCTGATTTTTCTTTTCGAATCAAGGAAAAAGCTAA AATTGTTGAAGAACAACGTAAACAAGTTGAAAAAGAAGAAATGATAGCAAATACAATCGTATTTTTAATCTTTTTTATCA TGTTTGTCCTGCCCATTCTTGCAATGATTTTTGGAAAAAAAGTAGGTCCCAAAAAATATCTCTGGATGGGGATCATTTTT ACACCTTGGTTTTTAAATTTAAATGCCGGCAATAGACATTCTGGTGGAATCTATGGTAGTCATTCAGGAAGAGGAGAATT TAGAGGTGGTGGAGGATCATCTGGTGGTGGTGGTGCCACAGGACGATGGTAA
Upstream 100 bases:
>100_bases CAATGCTTTGGGCAAAATTATGGTTTCGTGATGCTAAACCTATGCCAACATTCACGATTGATGACAATAGCCAACAAACA CCGAAGGTTAATTTTAATTA
Downstream 100 bases:
>100_bases AATGGGTATAAATTTTACAAGATAGCGAATTTTCTTAATAAAATTTATTACCGTATTACCCAATTTTAATGAAGAATTTC ATATCTTACTCTATAATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKFFQYFMQRSVFQYLLAFIGFLYLLTVLGGGACSQIKFPPLTGYVNDVAHLLDNATKQNLTEKLAELEEKTGDQIAIVT LPTLSGNDIETYSNSLFRKWGLGQKQINNGVLLVIAPNEREMRIEVGYGLEGVLTDALSAVIINSFVLPNFREGNYQKGI VEAVHAIINVITESDSDFSFRIKEKAKIVEEQRKQVEKEEMIANTIVFLIFFIMFVLPILAMIFGKKVGPKKYLWMGIIF TPWFLNLNAGNRHSGGIYGSHSGRGEFRGGGGSSGGGGATGRW
Sequences:
>Translated_283_residues MKFFQYFMQRSVFQYLLAFIGFLYLLTVLGGGACSQIKFPPLTGYVNDVAHLLDNATKQNLTEKLAELEEKTGDQIAIVT LPTLSGNDIETYSNSLFRKWGLGQKQINNGVLLVIAPNEREMRIEVGYGLEGVLTDALSAVIINSFVLPNFREGNYQKGI VEAVHAIINVITESDSDFSFRIKEKAKIVEEQRKQVEKEEMIANTIVFLIFFIMFVLPILAMIFGKKVGPKKYLWMGIIF TPWFLNLNAGNRHSGGIYGSHSGRGEFRGGGGSSGGGGATGRW >Mature_283_residues MKFFQYFMQRSVFQYLLAFIGFLYLLTVLGGGACSQIKFPPLTGYVNDVAHLLDNATKQNLTEKLAELEEKTGDQIAIVT LPTLSGNDIETYSNSLFRKWGLGQKQINNGVLLVIAPNEREMRIEVGYGLEGVLTDALSAVIINSFVLPNFREGNYQKGI VEAVHAIINVITESDSDFSFRIKEKAKIVEEQRKQVEKEEMIANTIVFLIFFIMFVLPILAMIFGKKVGPKKYLWMGIIF TPWFLNLNAGNRHSGGIYGSHSGRGEFRGGGGSSGGGGATGRW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=134, Percent_Identity=38.8059701492537, Blast_Score=101, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 31435; Mature: 31435
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFQYFMQRSVFQYLLAFIGFLYLLTVLGGGACSQIKFPPLTGYVNDVAHLLDNATKQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LTEKLAELEEKTGDQIAIVTLPTLSGNDIETYSNSLFRKWGLGQKQINNGVLLVIAPNER HHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCC EMRIEVGYGLEGVLTDALSAVIINSFVLPNFREGNYQKGIVEAVHAIINVITESDSDFSF EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE RIKEKAKIVEEQRKQVEKEEMIANTIVFLIFFIMFVLPILAMIFGKKVGPKKYLWMGIIF EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHEEE TPWFLNLNAGNRHSGGIYGSHSGRGEFRGGGGSSGGGGATGRW CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKFFQYFMQRSVFQYLLAFIGFLYLLTVLGGGACSQIKFPPLTGYVNDVAHLLDNATKQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LTEKLAELEEKTGDQIAIVTLPTLSGNDIETYSNSLFRKWGLGQKQINNGVLLVIAPNER HHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCC EMRIEVGYGLEGVLTDALSAVIINSFVLPNFREGNYQKGIVEAVHAIINVITESDSDFSF EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE RIKEKAKIVEEQRKQVEKEEMIANTIVFLIFFIMFVLPILAMIFGKKVGPKKYLWMGIIF EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHEEE TPWFLNLNAGNRHSGGIYGSHSGRGEFRGGGGSSGGGGATGRW CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]