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The map label for this gene is yfdR [C]

Identifier: 49475309

GI number: 49475309

Start: 599750

End: 600370

Strand: Reverse

Name: yfdR [C]

Synonym: BH05140

Alternate gene names: 49475309

Gene position: 600370-599750 (Counterclockwise)

Preceding gene: 49475310

Following gene: 49475297

Centisome position: 31.09

GC content: 39.45

Gene sequence:

>621_bases
ATGGCTAAAGCTCAATTATCACAAAATGGAGAAGCGCGCGCTTGGCAAAGAATGCTTTCTGGCCGGCGACTTGATCTTCT
AAACCCCTCTCCTTTCGATATCGAAATCGAAGATATTGCTCATGGACTAGCTCGCGTCGCACGTTGGAACGGTCAAACAC
AAGGAGAATATGCCTATTCTGTTGCACAACATTCACTCTTGGTAGAACAAATATTTCAGAAACTTTTTCCACAATCGCAG
AACAATGAATGCCTTTGTGCTCTTCTTCATGATGCACCAGAGTATGTCATCGGTGATATAATTTCACCCTTTAAAGCTGT
TATAGGAAAACAATATGAACTCATTGAAAAACGTATACAAGATGCTATACATATGCGCTTTTCTCTCCCCGTTGCTCCCT
CTCAAAAACTCTTAAAAAAAATCAAACAAGCTGATCGCATTGCTGCATTTCATGAATCTATTATTCTTGCCGGATTTAAT
ACAGAAGAAGCCCTTCGCTATTTCGGTCACCCAAATAATATTTCACCCGAAGGACTCAATTTGCAACCATGCTCCACAAC
GAAAATTGAGAACGCTTTTTTAAAACGTTTTCATGATCTTGATGTTGAAAGATTACATTGA

Upstream 100 bases:

>100_bases
ATCATAATACTCCCTTTACAGTAAAAGATGTTCCTGTCACTATAAGTATTGCTGAAAATATGAATTTTACTTTCCCTGAA
AGCACTGTGTAAACTCACTA

Downstream 100 bases:

>100_bases
TATCGCTTTTGATCGTTTACCTTTTGTCACAACCTAAAACACTCCATAGTATTTTAGCTTCATGATCCGAATCTTTTTAT
ACATGCAAAAGTCTCCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MAKAQLSQNGEARAWQRMLSGRRLDLLNPSPFDIEIEDIAHGLARVARWNGQTQGEYAYSVAQHSLLVEQIFQKLFPQSQ
NNECLCALLHDAPEYVIGDIISPFKAVIGKQYELIEKRIQDAIHMRFSLPVAPSQKLLKKIKQADRIAAFHESIILAGFN
TEEALRYFGHPNNISPEGLNLQPCSTTKIENAFLKRFHDLDVERLH

Sequences:

>Translated_206_residues
MAKAQLSQNGEARAWQRMLSGRRLDLLNPSPFDIEIEDIAHGLARVARWNGQTQGEYAYSVAQHSLLVEQIFQKLFPQSQ
NNECLCALLHDAPEYVIGDIISPFKAVIGKQYELIEKRIQDAIHMRFSLPVAPSQKLLKKIKQADRIAAFHESIILAGFN
TEEALRYFGHPNNISPEGLNLQPCSTTKIENAFLKRFHDLDVERLH
>Mature_205_residues
AKAQLSQNGEARAWQRMLSGRRLDLLNPSPFDIEIEDIAHGLARVARWNGQTQGEYAYSVAQHSLLVEQIFQKLFPQSQN
NECLCALLHDAPEYVIGDIISPFKAVIGKQYELIEKRIQDAIHMRFSLPVAPSQKLLKKIKQADRIAAFHESIILAGFNT
EEALRYFGHPNNISPEGLNLQPCSTTKIENAFLKRFHDLDVERLH

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23431; Mature: 23300

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAQLSQNGEARAWQRMLSGRRLDLLNPSPFDIEIEDIAHGLARVARWNGQTQGEYAYS
CCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHH
VAQHSLLVEQIFQKLFPQSQNNECLCALLHDAPEYVIGDIISPFKAVIGKQYELIEKRIQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DAIHMRFSLPVAPSQKLLKKIKQADRIAAFHESIILAGFNTEEALRYFGHPNNISPEGLN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCCCCCCCCCC
LQPCSTTKIENAFLKRFHDLDVERLH
CCCCCCHHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure 
AKAQLSQNGEARAWQRMLSGRRLDLLNPSPFDIEIEDIAHGLARVARWNGQTQGEYAYS
CCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHH
VAQHSLLVEQIFQKLFPQSQNNECLCALLHDAPEYVIGDIISPFKAVIGKQYELIEKRIQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DAIHMRFSLPVAPSQKLLKKIKQADRIAAFHESIILAGFNTEEALRYFGHPNNISPEGLN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCCCCCCCCCC
LQPCSTTKIENAFLKRFHDLDVERLH
CCCCCCHHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282711 [H]