| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475204
Identifier: 49475204
GI number: 49475204
Start: 464624
End: 466312
Strand: Reverse
Name: 49475204
Synonym: BH04050
Alternate gene names: NA
Gene position: 466312-464624 (Counterclockwise)
Preceding gene: 49475213
Following gene: 49475203
Centisome position: 24.15
GC content: 34.81
Gene sequence:
>1689_bases ATGATCAATCTTAATAGTGGGTACCGAAGTAATCTAAAACATTGGCTTACACTTATTATTGGATTTTTTGCTATTCTGGC AATTATATTTGTCGGCGGTTTTTATATGGCAAAACCCTATCTTGACAGTTTTGTGAAACAAGAAATAGCACGTCGCTCCA TAAAAGCAAAAACATCTGAAGTTAGTATCATAGGCAAAGTCAATTTGACAAATGTTACCCTACCAGTTCCTGCCGGAATA TCACTTAAAATTGGTGCCATTTCAGCTCGCCCCCCTCTTTTTTTTATTCCTGGCACTTTTACACTTTATAATGTTGACTT AAAGCGTCATAATATTCACCTCCAAATTCCCAAAATTTCTTTTAATAGCGTATCCTTAAAAGAAAAGGATAAAACAATCA CATCGCGTCTTTTGCAACAAATTATGCGTCTTCAATTTGCCTCCATGATTGCACCAGATATATCTCTTTCTGTAAAAAAC GAGAATAAATTAACCGGAAAATTTGAAATAAAAGGTTTTCAGCTTTCTCATTTTAAAAATGGTCGTATTGGTTCTGTTAG CATCAAAAATATGGGCCTTGCGACGATAACCGCAAATGGTACAAAACAGATGCTGAACGTCAAGAGTAATACAATAAAAG CGCAAGATATTGACATCAATTACGCACATTCTATCATTTTCGGAAAACGTAACGTTCTCAATCAAGGAAAAACCATCATT GGTCCTATTTCTTTAGAGAACGTAATGGTCAATGTTTTTGAAGAAAAAGAGAAGAATATTTCCTTTTCTCTTGGCAAATT CAAAACATCTGGCCTAAAAATGAAGCCGTTCAAACAAACACCTGAGAGATTAGTTGAAGCTTATCTTAATGCAAGGAAAG AAAATAACCAAGAAGCTGAAAAAATAACAGAGAATGCTATTATTCTAAACACTCTACTTGCTACTACTTCAATCGATGCC AAAATTGATAACGTCACCATTGATATACCACAGTTAAAAGCAACCCTTGCATCCTTCCAATTCAAACCAAGCCAATGGGA GCAGCCTATACCGAAAAAACTTCTGCTCTCTCTCGATAATCTCTCGATTGTACCTAAAAAAATGAATGAAAAAGACTTAG AATTCCTCCAAAACATGGATGTTGAACGCCTTGATCTTTCAGGAAAACTTAATATCTCCTATGATGAAAAAAGGCATACC CTCCTTCTTAATCCAATGTCTTTCAATATAAAGAATATTGGCTCTGGAGAAATATCTGCTAAAGCTATTGATGTTGATAC AAAGCTCTTCTCTGGGCAAAAAGAGGCAATAACTGCTGTCTCTCAAAATTTTGGTATAACTGAAATTGACGTACGCTATA CGGATGCTGGTTTCATTGATAAACTCTTTTCTTATCTTGCACAAAATCTTAATGACAGCAAACATGATCTCAAAAAGGAA CTCTATGATGACTTCTATATCATGATGACACAAAGCCCCCGAATATTTTTGAAAAATCACGAAAAAGCTGAAAGTATTGC AAAGTCCTTTGGTGATTTTGCTAAAAATCCACAAACATTGATTATTAAAATAACAGCAAAAGATAACAAAGGCCTCACAA TCGCTGATCTCGAAACTGCACTTCAAAATGATTTGTCCACAGCTTTGAGCAAAGTAAATCTCACTGTCAAAAATGAATCA TCACCTTAA
Upstream 100 bases:
>100_bases ACTGTTGAAAATGGTACATGCTATATTTTAACATTTGTCGTTATTTAAAGAAATTTATTTTCACTCTTTTGAGAAAATGA TAAAAGTGAAAGAAAAAATA
Downstream 100 bases:
>100_bases AAAAATATGTTTATTTTTTAATATAATGATCTTGTCTATAAGATTTAAGAGCTTTATCCTTCTTTTTTCTTTTGTATGGT ACAAGAGAATACCATACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MINLNSGYRSNLKHWLTLIIGFFAILAIIFVGGFYMAKPYLDSFVKQEIARRSIKAKTSEVSIIGKVNLTNVTLPVPAGI SLKIGAISARPPLFFIPGTFTLYNVDLKRHNIHLQIPKISFNSVSLKEKDKTITSRLLQQIMRLQFASMIAPDISLSVKN ENKLTGKFEIKGFQLSHFKNGRIGSVSIKNMGLATITANGTKQMLNVKSNTIKAQDIDINYAHSIIFGKRNVLNQGKTII GPISLENVMVNVFEEKEKNISFSLGKFKTSGLKMKPFKQTPERLVEAYLNARKENNQEAEKITENAIILNTLLATTSIDA KIDNVTIDIPQLKATLASFQFKPSQWEQPIPKKLLLSLDNLSIVPKKMNEKDLEFLQNMDVERLDLSGKLNISYDEKRHT LLLNPMSFNIKNIGSGEISAKAIDVDTKLFSGQKEAITAVSQNFGITEIDVRYTDAGFIDKLFSYLAQNLNDSKHDLKKE LYDDFYIMMTQSPRIFLKNHEKAESIAKSFGDFAKNPQTLIIKITAKDNKGLTIADLETALQNDLSTALSKVNLTVKNES SP
Sequences:
>Translated_562_residues MINLNSGYRSNLKHWLTLIIGFFAILAIIFVGGFYMAKPYLDSFVKQEIARRSIKAKTSEVSIIGKVNLTNVTLPVPAGI SLKIGAISARPPLFFIPGTFTLYNVDLKRHNIHLQIPKISFNSVSLKEKDKTITSRLLQQIMRLQFASMIAPDISLSVKN ENKLTGKFEIKGFQLSHFKNGRIGSVSIKNMGLATITANGTKQMLNVKSNTIKAQDIDINYAHSIIFGKRNVLNQGKTII GPISLENVMVNVFEEKEKNISFSLGKFKTSGLKMKPFKQTPERLVEAYLNARKENNQEAEKITENAIILNTLLATTSIDA KIDNVTIDIPQLKATLASFQFKPSQWEQPIPKKLLLSLDNLSIVPKKMNEKDLEFLQNMDVERLDLSGKLNISYDEKRHT LLLNPMSFNIKNIGSGEISAKAIDVDTKLFSGQKEAITAVSQNFGITEIDVRYTDAGFIDKLFSYLAQNLNDSKHDLKKE LYDDFYIMMTQSPRIFLKNHEKAESIAKSFGDFAKNPQTLIIKITAKDNKGLTIADLETALQNDLSTALSKVNLTVKNES SP >Mature_562_residues MINLNSGYRSNLKHWLTLIIGFFAILAIIFVGGFYMAKPYLDSFVKQEIARRSIKAKTSEVSIIGKVNLTNVTLPVPAGI SLKIGAISARPPLFFIPGTFTLYNVDLKRHNIHLQIPKISFNSVSLKEKDKTITSRLLQQIMRLQFASMIAPDISLSVKN ENKLTGKFEIKGFQLSHFKNGRIGSVSIKNMGLATITANGTKQMLNVKSNTIKAQDIDINYAHSIIFGKRNVLNQGKTII GPISLENVMVNVFEEKEKNISFSLGKFKTSGLKMKPFKQTPERLVEAYLNARKENNQEAEKITENAIILNTLLATTSIDA KIDNVTIDIPQLKATLASFQFKPSQWEQPIPKKLLLSLDNLSIVPKKMNEKDLEFLQNMDVERLDLSGKLNISYDEKRHT LLLNPMSFNIKNIGSGEISAKAIDVDTKLFSGQKEAITAVSQNFGITEIDVRYTDAGFIDKLFSYLAQNLNDSKHDLKKE LYDDFYIMMTQSPRIFLKNHEKAESIAKSFGDFAKNPQTLIIKITAKDNKGLTIADLETALQNDLSTALSKVNLTVKNES SP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62929; Mature: 62929
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLNSGYRSNLKHWLTLIIGFFAILAIIFVGGFYMAKPYLDSFVKQEIARRSIKAKTSE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VSIIGKVNLTNVTLPVPAGISLKIGAISARPPLFFIPGTFTLYNVDLKRHNIHLQIPKIS EEEEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCEEEEEEEEEECEEEEEECCEE FNSVSLKEKDKTITSRLLQQIMRLQFASMIAPDISLSVKNENKLTGKFEIKGFQLSHFKN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEEEECCCC GRIGSVSIKNMGLATITANGTKQMLNVKSNTIKAQDIDINYAHSIIFGKRNVLNQGKTII CCEEEEEECCCCEEEEECCCHHHHEEECCCEEEEEECCCEEEHEEEECCHHHHHCCCEEE GPISLENVMVNVFEEKEKNISFSLGKFKTSGLKMKPFKQTPERLVEAYLNARKENNQEAE ECEEHHHHHHHHHHHHCCCCEEEECCEECCCEEECCCCCCHHHHHHHHHHHHCCCCHHHH KITENAIILNTLLATTSIDAKIDNVTIDIPQLKATLASFQFKPSQWEQPIPKKLLLSLDN HHHCCHHEEEHHHHHCCCCCEECEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHEECCC LSIVPKKMNEKDLEFLQNMDVERLDLSGKLNISYDEKRHTLLLNPMSFNIKNIGSGEISA CEECCCCCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCEEEECCCEECEECCCCCCCEE KAIDVDTKLFSGQKEAITAVSQNFGITEIDVRYTDAGFIDKLFSYLAQNLNDSKHDLKKE EEEECCHHHHCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHH LYDDFYIMMTQSPRIFLKNHEKAESIAKSFGDFAKNPQTLIIKITAKDNKGLTIADLETA HCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHH LQNDLSTALSKVNLTVKNESSP HHHHHHHHHHHEEEEEECCCCC >Mature Secondary Structure MINLNSGYRSNLKHWLTLIIGFFAILAIIFVGGFYMAKPYLDSFVKQEIARRSIKAKTSE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VSIIGKVNLTNVTLPVPAGISLKIGAISARPPLFFIPGTFTLYNVDLKRHNIHLQIPKIS EEEEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCEEEEEEEEEECEEEEEECCEE FNSVSLKEKDKTITSRLLQQIMRLQFASMIAPDISLSVKNENKLTGKFEIKGFQLSHFKN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEEEECCCC GRIGSVSIKNMGLATITANGTKQMLNVKSNTIKAQDIDINYAHSIIFGKRNVLNQGKTII CCEEEEEECCCCEEEEECCCHHHHEEECCCEEEEEECCCEEEHEEEECCHHHHHCCCEEE GPISLENVMVNVFEEKEKNISFSLGKFKTSGLKMKPFKQTPERLVEAYLNARKENNQEAE ECEEHHHHHHHHHHHHCCCCEEEECCEECCCEEECCCCCCHHHHHHHHHHHHCCCCHHHH KITENAIILNTLLATTSIDAKIDNVTIDIPQLKATLASFQFKPSQWEQPIPKKLLLSLDN HHHCCHHEEEHHHHHCCCCCEECEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHEECCC LSIVPKKMNEKDLEFLQNMDVERLDLSGKLNISYDEKRHTLLLNPMSFNIKNIGSGEISA CEECCCCCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCEEEECCCEECEECCCCCCCEE KAIDVDTKLFSGQKEAITAVSQNFGITEIDVRYTDAGFIDKLFSYLAQNLNDSKHDLKKE EEEECCHHHHCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHH LYDDFYIMMTQSPRIFLKNHEKAESIAKSFGDFAKNPQTLIIKITAKDNKGLTIADLETA HCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHH LQNDLSTALSKVNLTVKNESSP HHHHHHHHHHHEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA