| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475123
Identifier: 49475123
GI number: 49475123
Start: 394780
End: 395322
Strand: Reverse
Name: 49475123
Synonym: BH03200
Alternate gene names: NA
Gene position: 395322-394780 (Counterclockwise)
Preceding gene: 49475126
Following gene: 49475122
Centisome position: 20.47
GC content: 41.44
Gene sequence:
>543_bases ATGCACCCCCGCGAGACGATAAGAGAAACATTTGTTGCGTTAATAAAGGCAGCAAAAACAGTGGCTGGTGACAATGTTTT CAATATGCGTGACTTCAATTTATTTATTGAAACAATGCCAGCTATTAATATCTCAACGCAAAGTGAAACCATTGAAGATG GACATGATTTTGGCTTAAGGCGGCGTGTTTTAACAGTAGATGTTGAATGCTATGCAACATGTGAAGATGGCGCACGTTTT GTTGACCAATTAGCATGGGAAGTTGAAGAGATTTTCTATGCCAATCCCAATCTTAACAACACCGTTGAGACATGCCGCTT ACAAAATATTGCTTTTGCCTTTGGTGATAATGGTTCCCTAGCACTCCATGGTGCAATTTTAACCTTTGACGTGACGCACA TAACCAATATCCCCTGCCCTGATGAAGGAAAGGCAACCGTAGGAGTTGTTGAACCCCTTGTCGGTTTTAAACCCGAAACA GGTATGGGAAACAAAGACAAATACCATAAAATTGAAGGTGACCATGTTAGAGCGACGCGATAA
Upstream 100 bases:
>100_bases AGCTGATTATTTTTGCAACTTTATTACTCATAATCAATAATAGTATCATTATTAATCCTAGTCAATCATTTTATACACTT AATTGAACAGGAGCCCCCCC
Downstream 100 bases:
>100_bases AGAGATCACCGATTTAAAGAGACGTGTAGCCAATATGGTTGTGGTAGGGAAAATTAGCCATGTTGACCATAAAAACGCAC GCTATCGAGTAAAAACTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MHPRETIRETFVALIKAAKTVAGDNVFNMRDFNLFIETMPAINISTQSETIEDGHDFGLRRRVLTVDVECYATCEDGARF VDQLAWEVEEIFYANPNLNNTVETCRLQNIAFAFGDNGSLALHGAILTFDVTHITNIPCPDEGKATVGVVEPLVGFKPET GMGNKDKYHKIEGDHVRATR
Sequences:
>Translated_180_residues MHPRETIRETFVALIKAAKTVAGDNVFNMRDFNLFIETMPAINISTQSETIEDGHDFGLRRRVLTVDVECYATCEDGARF VDQLAWEVEEIFYANPNLNNTVETCRLQNIAFAFGDNGSLALHGAILTFDVTHITNIPCPDEGKATVGVVEPLVGFKPET GMGNKDKYHKIEGDHVRATR >Mature_180_residues MHPRETIRETFVALIKAAKTVAGDNVFNMRDFNLFIETMPAINISTQSETIEDGHDFGLRRRVLTVDVECYATCEDGARF VDQLAWEVEEIFYANPNLNNTVETCRLQNIAFAFGDNGSLALHGAILTFDVTHITNIPCPDEGKATVGVVEPLVGFKPET GMGNKDKYHKIEGDHVRATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20060; Mature: 20060
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPRETIRETFVALIKAAKTVAGDNVFNMRDFNLFIETMPAINISTQSETIEDGHDFGLR CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHEEEEEECCCEEECCCCCCCCCCCCCCCE RRVLTVDVECYATCEDGARFVDQLAWEVEEIFYANPNLNNTVETCRLQNIAFAFGDNGSL EEEEEEEEEEEEECHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHEEEEEEECCCCCE ALHGAILTFDVTHITNIPCPDEGKATVGVVEPLVGFKPETGMGNKDKYHKIEGDHVRATR EEEEEEEEEEEHHHCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCEEECCCCEEECCC >Mature Secondary Structure MHPRETIRETFVALIKAAKTVAGDNVFNMRDFNLFIETMPAINISTQSETIEDGHDFGLR CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHEEEEEECCCEEECCCCCCCCCCCCCCCE RRVLTVDVECYATCEDGARFVDQLAWEVEEIFYANPNLNNTVETCRLQNIAFAFGDNGSL EEEEEEEEEEEEECHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHEEEEEEECCCCCE ALHGAILTFDVTHITNIPCPDEGKATVGVVEPLVGFKPETGMGNKDKYHKIEGDHVRATR EEEEEEEEEEEHHHCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA