| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is gp24
Identifier: 49475122
GI number: 49475122
Start: 394110
End: 394799
Strand: Reverse
Name: gp24
Synonym: BH03190
Alternate gene names: NA
Gene position: 394799-394110 (Counterclockwise)
Preceding gene: 49475123
Following gene: 49475121
Centisome position: 20.44
GC content: 43.62
Gene sequence:
>690_bases ATGTTAGAGCGACGCGATAAAGAGATCACCGATTTAAAGAGACGTGTAGCCAATATGGTTGTGGTAGGGAAAATTAGCCA TGTTGACCATAAAAACGCACGCTATCGAGTAAAAACTGGAAATCTTGTCAGTGATTGGATTCCAGATACCCAAGCCCGTG CTGGTAAAACACGCTCTTATGAAGGGCGCGATGTTGGAGAACAAGTGGTTGTTGTTTCATCATCAGGCGATTTATCACAA GGGGTGATTGTTGGCTCTATTCATACCGATGCAAACCAAGCAGCCGATAAAGGCAATCTTCATAAGACACTTTATCCAGA TGGAACCACCATTGAGTATGACGATGAACAAAACAGCTATGCCCTTCACCTCACATCAGGAGGAAAGTTTAGTCTCACGA TTTCTGATGGCGTATCGATAAAAGGGGATGGTAAAAAGTTAGAACTGCAAGCCGCAGAGGGCATCAAAATTATTTCACAA GGTGACCTGAGTTTAAGTGCAGAAAAAAACATTGCCCTGAAAGCAGGTGGAAGTGTTTCACTCCATTCGGATGATGGCAT TGCTCTTCATTCAAGTGAGGGTGTTTCCATCCATTCTAGTGATTTAAAGCATAATGGCACCAATATTGGAAACAGCCATG TTCATGGAGGTGTTTCCCCTGGTGGCTCCATGACAGGAGGTCCAAATTGA
Upstream 100 bases:
>100_bases GAAGGAAAGGCAACCGTAGGAGTTGTTGAACCCCTTGTCGGTTTTAAACCCGAAACAGGTATGGGAAACAAAGACAAATA CCATAAAATTGAAGGTGACC
Downstream 100 bases:
>100_bases ACAGTGGAATGGACCGCACAACAGGAAAGCCATTGGTTGGCATAGAGCATTTGCGGCAGTCGATTATTGATATCTTATCA ACACGCATTGGCACACGGGT
Product: Phage-related baseplate assembly protein
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Baseplate Assembly Protein GpV; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein V; Phage-Related Baseplate Protein; Phage P2-Like Baseplate Assembly Protein; Phage Baseplate Assembly; Prophage LambdaW5 Baseplate Assembly Protein V; Phage P2 Baseplate Assembly GpV-Like Protein; Phage P2 Baseplate Assembly Protein GPV; Baseplate Assembly Protein; Phage P2 Baseplate Assembly Protein GpV
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MLERRDKEITDLKRRVANMVVVGKISHVDHKNARYRVKTGNLVSDWIPDTQARAGKTRSYEGRDVGEQVVVVSSSGDLSQ GVIVGSIHTDANQAADKGNLHKTLYPDGTTIEYDDEQNSYALHLTSGGKFSLTISDGVSIKGDGKKLELQAAEGIKIISQ GDLSLSAEKNIALKAGGSVSLHSDDGIALHSSEGVSIHSSDLKHNGTNIGNSHVHGGVSPGGSMTGGPN
Sequences:
>Translated_229_residues MLERRDKEITDLKRRVANMVVVGKISHVDHKNARYRVKTGNLVSDWIPDTQARAGKTRSYEGRDVGEQVVVVSSSGDLSQ GVIVGSIHTDANQAADKGNLHKTLYPDGTTIEYDDEQNSYALHLTSGGKFSLTISDGVSIKGDGKKLELQAAEGIKIISQ GDLSLSAEKNIALKAGGSVSLHSDDGIALHSSEGVSIHSSDLKHNGTNIGNSHVHGGVSPGGSMTGGPN >Mature_229_residues MLERRDKEITDLKRRVANMVVVGKISHVDHKNARYRVKTGNLVSDWIPDTQARAGKTRSYEGRDVGEQVVVVSSSGDLSQ GVIVGSIHTDANQAADKGNLHKTLYPDGTTIEYDDEQNSYALHLTSGGKFSLTISDGVSIKGDGKKLELQAAEGIKIISQ GDLSLSAEKNIALKAGGSVSLHSDDGIALHSSEGVSIHSSDLKHNGTNIGNSHVHGGVSPGGSMTGGPN
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24148; Mature: 24148
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERRDKEITDLKRRVANMVVVGKISHVDHKNARYRVKTGNLVSDWIPDTQARAGKTRSY CCCCCCCHHHHHHHHHHCEEEEEEEECCCCCCCEEEEEECCCHHHCCCCCHHHCCCCCCC EGRDVGEQVVVVSSSGDLSQGVIVGSIHTDANQAADKGNLHKTLYPDGTTIEYDDEQNSY CCCCCCCEEEEEECCCCCCCCEEEEEEECCCHHCCCCCCCCEEECCCCCEEEECCCCCCE ALHLTSGGKFSLTISDGVSIKGDGKKLELQAAEGIKIISQGDLSLSAEKNIALKAGGSVS EEEEECCCEEEEEECCCEEEECCCCEEEEEECCCEEEEECCCEEEECCCCEEEEECCEEE LHSDDGIALHSSEGVSIHSSDLKHNGTNIGNSHVHGGVSPGGSMTGGPN EECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLERRDKEITDLKRRVANMVVVGKISHVDHKNARYRVKTGNLVSDWIPDTQARAGKTRSY CCCCCCCHHHHHHHHHHCEEEEEEEECCCCCCCEEEEEECCCHHHCCCCCHHHCCCCCCC EGRDVGEQVVVVSSSGDLSQGVIVGSIHTDANQAADKGNLHKTLYPDGTTIEYDDEQNSY CCCCCCCEEEEEECCCCCCCCEEEEEEECCCHHCCCCCCCCEEECCCCCEEEECCCCCCE ALHLTSGGKFSLTISDGVSIKGDGKKLELQAAEGIKIISQGDLSLSAEKNIALKAGGSVS EEEEECCCEEEEEECCCEEEECCCCEEEEEECCCEEEEECCCEEEECCCCEEEEECCEEE LHSDDGIALHSSEGVSIHSSDLKHNGTNIGNSHVHGGVSPGGSMTGGPN EECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA