| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475106
Identifier: 49475106
GI number: 49475106
Start: 378223
End: 378771
Strand: Reverse
Name: 49475106
Synonym: BH03020
Alternate gene names: NA
Gene position: 378771-378223 (Counterclockwise)
Preceding gene: 49475107
Following gene: 49475105
Centisome position: 19.61
GC content: 36.98
Gene sequence:
>549_bases ATGAACACTCTTATTCCGATATCGGAACAAACTGTTGGACAGGAAACTGTTCAAACTGTTAACGCACGTGATTTGCATGT ATTTTTGGGAATTACATCAAAGTTTGCAGACTGGATTAAAAATCGCATTAAAGAATGTAATTTTCGAGAAAATATAGACT TTATAGGTTTTTCTAAAAATTTAGAAAAAGGTGGGCGTCCAAGCATAGAATACCACATTACCTTAGACATGGCTAAACAC CTTTCTATGATAGAGAGGAATGAGAAAGGACATGAAGCTCGTCAATATTTTAATTTTTTATTTGACAACATGTCAATATT ATGTCTATTGTCGAATCAGGTGCCTAAGAAACACCTTAAATGCATAGCGGATGGATTGCCGAAACAGTTTATTTTCCGCA CATTAAAGGCTTTGACTCATTATATGCGTGTGGCATATAGTGGTTTTGTCGGGTGTAGTTACGCTATACAATACCCTTAT GGGAAAAGCGTGACGACGGACTATGCACCGTGTTTCTTAGCACCCGGCACTCTTTTTGAGTGTCATTAA
Upstream 100 bases:
>100_bases TTGGGGGAAAGCATAACGACGGACTTATCGCCGTGTTTTTGAGCACCCGGCACTCTTTTATCGAGTGTCAATCAAAAACA TTTAACGATAAGGAGTTCTC
Downstream 100 bases:
>100_bases GAAACGTCTAACTGCATAGGAGTTCACATGAACACTCTTATAGAAATATCAGAACAGGTTATTGATCAAGAAACTGTTCA AACGGTCAATGCGCGTGATT
Product: anti-repressor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKNLEKGGRPSIEYHITLDMAKH LSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLKCIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPY GKSVTTDYAPCFLAPGTLFECH
Sequences:
>Translated_182_residues MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKNLEKGGRPSIEYHITLDMAKH LSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLKCIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPY GKSVTTDYAPCFLAPGTLFECH >Mature_182_residues MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKNLEKGGRPSIEYHITLDMAKH LSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLKCIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPY GKSVTTDYAPCFLAPGTLFECH
Specific function: Unknown
COG id: COG3561
COG function: function code K; Phage anti-repressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013557 - InterPro: IPR018876 [H]
Pfam domain/function: PF08346 AntA; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 20897; Mature: 20897
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKN CCCCCCCCHHHCCHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEECCCC LEKGGRPSIEYHITLDMAKHLSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLK CCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH CIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPYGKSVTTDYAPCFLAPGTLFE HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEE CH CC >Mature Secondary Structure MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKN CCCCCCCCHHHCCHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEECCCC LEKGGRPSIEYHITLDMAKHLSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLK CCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH CIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPYGKSVTTDYAPCFLAPGTLFE HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEE CH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]