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The map label for this gene is gpD

Identifier: 49475107

GI number: 49475107

Start: 379083

End: 380390

Strand: Reverse

Name: gpD

Synonym: BH03030

Alternate gene names: NA

Gene position: 380390-379083 (Counterclockwise)

Preceding gene: 49475108

Following gene: 49475106

Centisome position: 19.7

GC content: 45.57

Gene sequence:

>1308_bases
ATGAAACCTTTTTGCACAGTGATGGCAAATGGAGAGGACATCACAAGAACGCTGATGGACTATGTTTTGTCGATTGAAAT
TACGGATGAAGCAGAAGACAAAAGTGACCGCATCACCATAGAGCTTGATGACCGTGCCCGTGAGTGCGACAATGGCTTTC
TTGATATCCCTCTCATCGGAACAATCATTTCTGTCACACTTGGCTATGAAGGCGGTAAAAACCGCGATATGGGAGCCTAT
CTGATTGATGAAATCTCTGTAAGCAGCCCCCCACAAAGTTTAAGCGTGACAGGACGCGCCGCCTCTATGAACACGTCTTA
TAGAACACCCAAAAGCCAATCCTATCACCAACAAACCCTTGGCAATATTATTCAAGAGATAGCAGAGCGCAATGGCTATA
CACCAAAAGTTGATCCTGCTCTTGCAAAAATTGTTGTGCGTCACATTGATCAAACTTCTGAGAGCGATATGGCTTTTGCC
ACACGCCTTGCAGAAGACTATGATGCGGTAGCAAAACCCGTTGATGGCAAACTTGTTTTAGCTAAACGGGGCGAAGGCAA
AGCCATCACTGGTGAAACACTCCCCGTTGTTGTTATCCATGAGAAACTCTGCAGCTCTTGGGATTTTAAATACAGCGCAC
GGGATGAAGCAGGAGCAGCCAATGGCTTAGCAACAGAGGCAGGAGATGATCAAAAAGCCGCCGCTGATGCACGAGAACCA
GAAGAAGTTGAAGAAGGCGAAGATGTTATCCATATGGACGAAAGTGACGCCCCCAATTTGCCTAAAGCAGAAACGGAAGC
CAAAACACCTGAAAATCAAGAGCAAGATGAAGAGAAAAAAGGCGGTGTACTTGCAAGCTATCATGATATCCGTACTGGTG
AAAAAAAGGAAGTCAAGGTTGGCAAAGCACCGTTTCATGAACTCAAATACACCTACCACAATCAATCAGAAGCTGTTGCA
GCCATTGCGGCTTATCGCAATAAATCATCGCGTGGGAAATCTTCTTTCTCATGTGATATCGGAGGTGATCCCTTTGTGCA
AGCAGAAGCCAAGCTTGTTCAAGAGCCCCCTTTCCGCCCCTATATTCCAGCAGAATGGCGCATAAAAAGCGTTAAACACA
AGCTTGATAAAACAGGTGGTTATACCACAAAAATAGATTGCGAGCTTTTTGATGAAACCCAAGAAGATGCGGCTGGAAAC
GTTGCAAACACCACACCAGATAAAGATGATACCCTTGATCCAAACGCCCCCCCTAACGCATGTGATGAAGGCGAAGGCGT
AATCCATATGGATGAGGAAGATAGATAA

Upstream 100 bases:

>100_bases
CAGACTATGGACCCATCTTAAAAGCAGGCATCACAATCGTTTTGCCAATCCTTCCCTATCCTAAAGCCACACCGGTCATT
AGAATTTGGGGCAGTCAATC

Downstream 100 bases:

>100_bases
ATCAAATTAGCAAAAATGTAAAAAATCTCGAAAGCCGCTTGACAATGTAGCGACAATATGAATAATCGAATCAGGTGCCT
CAAAAACACCTTGACGATAA

Product: late control gene D protein

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Bacteriophage Regulatory Protein; Phage Late Control D Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Late Control Gene D Protein; Regulator Of Late Gene Expression; Bacteriophage Protein; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Prophage; Fels-2 Prophage Protein; Phage Protein D-Like; Phage Late Control; Phage Protein; Phage Tail Protein; Phage-Related Late Control Gene Protein; Pyocin R2_PP Tail Formation GPD; Cytoplasmic Protein; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Phage-Like Tail Protein; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Control Protein For Phage Late Genes Expression; Phage Regulator; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Gene D Protein; Late Gene Regulator; Phage Tail Protein D

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MKPFCTVMANGEDITRTLMDYVLSIEITDEAEDKSDRITIELDDRARECDNGFLDIPLIGTIISVTLGYEGGKNRDMGAY
LIDEISVSSPPQSLSVTGRAASMNTSYRTPKSQSYHQQTLGNIIQEIAERNGYTPKVDPALAKIVVRHIDQTSESDMAFA
TRLAEDYDAVAKPVDGKLVLAKRGEGKAITGETLPVVVIHEKLCSSWDFKYSARDEAGAANGLATEAGDDQKAAADAREP
EEVEEGEDVIHMDESDAPNLPKAETEAKTPENQEQDEEKKGGVLASYHDIRTGEKKEVKVGKAPFHELKYTYHNQSEAVA
AIAAYRNKSSRGKSSFSCDIGGDPFVQAEAKLVQEPPFRPYIPAEWRIKSVKHKLDKTGGYTTKIDCELFDETQEDAAGN
VANTTPDKDDTLDPNAPPNACDEGEGVIHMDEEDR

Sequences:

>Translated_435_residues
MKPFCTVMANGEDITRTLMDYVLSIEITDEAEDKSDRITIELDDRARECDNGFLDIPLIGTIISVTLGYEGGKNRDMGAY
LIDEISVSSPPQSLSVTGRAASMNTSYRTPKSQSYHQQTLGNIIQEIAERNGYTPKVDPALAKIVVRHIDQTSESDMAFA
TRLAEDYDAVAKPVDGKLVLAKRGEGKAITGETLPVVVIHEKLCSSWDFKYSARDEAGAANGLATEAGDDQKAAADAREP
EEVEEGEDVIHMDESDAPNLPKAETEAKTPENQEQDEEKKGGVLASYHDIRTGEKKEVKVGKAPFHELKYTYHNQSEAVA
AIAAYRNKSSRGKSSFSCDIGGDPFVQAEAKLVQEPPFRPYIPAEWRIKSVKHKLDKTGGYTTKIDCELFDETQEDAAGN
VANTTPDKDDTLDPNAPPNACDEGEGVIHMDEEDR
>Mature_435_residues
MKPFCTVMANGEDITRTLMDYVLSIEITDEAEDKSDRITIELDDRARECDNGFLDIPLIGTIISVTLGYEGGKNRDMGAY
LIDEISVSSPPQSLSVTGRAASMNTSYRTPKSQSYHQQTLGNIIQEIAERNGYTPKVDPALAKIVVRHIDQTSESDMAFA
TRLAEDYDAVAKPVDGKLVLAKRGEGKAITGETLPVVVIHEKLCSSWDFKYSARDEAGAANGLATEAGDDQKAAADAREP
EEVEEGEDVIHMDESDAPNLPKAETEAKTPENQEQDEEKKGGVLASYHDIRTGEKKEVKVGKAPFHELKYTYHNQSEAVA
AIAAYRNKSSRGKSSFSCDIGGDPFVQAEAKLVQEPPFRPYIPAEWRIKSVKHKLDKTGGYTTKIDCELFDETQEDAAGN
VANTTPDKDDTLDPNAPPNACDEGEGVIHMDEEDR

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47696; Mature: 47696

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFCTVMANGEDITRTLMDYVLSIEITDEAEDKSDRITIELDDRARECDNGFLDIPLIG
CCCEEEEEECCHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCHHHHHCCCEEEHHHHH
TIISVTLGYEGGKNRDMGAYLIDEISVSSPPQSLSVTGRAASMNTSYRTPKSQSYHQQTL
HHHHHEECCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEECCCCCCCCCCCHHHHHHH
GNIIQEIAERNGYTPKVDPALAKIVVRHIDQTSESDMAFATRLAEDYDAVAKPVDGKLVL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
AKRGEGKAITGETLPVVVIHEKLCSSWDFKYSARDEAGAANGLATEAGDDQKAAADAREP
EECCCCCEECCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
EEVEEGEDVIHMDESDAPNLPKAETEAKTPENQEQDEEKKGGVLASYHDIRTGEKKEVKV
HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEHHCCCCCCCEEEE
GKAPFHELKYTYHNQSEAVAAIAAYRNKSSRGKSSFSCDIGGDPFVQAEAKLVQEPPFRP
CCCCHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCC
YIPAEWRIKSVKHKLDKTGGYTTKIDCELFDETQEDAAGNVANTTPDKDDTLDPNAPPNA
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
CDEGEGVIHMDEEDR
CCCCCCEEECCCCCC
>Mature Secondary Structure
MKPFCTVMANGEDITRTLMDYVLSIEITDEAEDKSDRITIELDDRARECDNGFLDIPLIG
CCCEEEEEECCHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCHHHHHCCCEEEHHHHH
TIISVTLGYEGGKNRDMGAYLIDEISVSSPPQSLSVTGRAASMNTSYRTPKSQSYHQQTL
HHHHHEECCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEECCCCCCCCCCCHHHHHHH
GNIIQEIAERNGYTPKVDPALAKIVVRHIDQTSESDMAFATRLAEDYDAVAKPVDGKLVL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
AKRGEGKAITGETLPVVVIHEKLCSSWDFKYSARDEAGAANGLATEAGDDQKAAADAREP
EECCCCCEECCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
EEVEEGEDVIHMDESDAPNLPKAETEAKTPENQEQDEEKKGGVLASYHDIRTGEKKEVKV
HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEHHCCCCCCCEEEE
GKAPFHELKYTYHNQSEAVAAIAAYRNKSSRGKSSFSCDIGGDPFVQAEAKLVQEPPFRP
CCCCHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCC
YIPAEWRIKSVKHKLDKTGGYTTKIDCELFDETQEDAAGNVANTTPDKDDTLDPNAPPNA
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
CDEGEGVIHMDEEDR
CCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA