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The map label for this gene is ugpB [H]

Identifier: 49475000

GI number: 49475000

Start: 255847

End: 257172

Strand: Reverse

Name: ugpB [H]

Synonym: BH01870

Alternate gene names: 49475000

Gene position: 257172-255847 (Counterclockwise)

Preceding gene: 49475001

Following gene: 49474999

Centisome position: 13.32

GC content: 38.54

Gene sequence:

>1326_bases
ATGAGTCGTTTTTATCTTTCTATAGCGGCATTTACTGTTGCTATCAGCGTGACAACAGCGGGTTTTGCGCAAACAAAAAT
CAGCTTTTGGCATTCTATGAGCGGTGAGCTAGGAAAACAAACTGAAAACCTTATTAACGACTTTAATGCTAGTCAATCTG
AGTATAAAGTTATTCCTTCATTTCGTGGTGAATATGAAGAAGGTATGATCTCGCTCATTTCGGCATTCCGTGGAAAACAA
CAGCCGGTTCTCGTCCAAATTTATGAAATTGGCACTGGAACTATGATGGCTGCAAAAGGTGCAATTTATCCCATTTATCA
ATTGATGAAAGATACAAAACAAGAATTCGATCCTACAGATTATTTGCCTGCTATAAGTGGTTATTATTCTGATGTTCAGG
GACGAATGCTATCTATGCCTTTCAACGCTTCAACACCAATCCTTTATTATAATAAAGATATCTTTAAAAAAGCAGGACTT
GATCCAGAACAGCCACCTAAAACATGGCAAGATGTCGAAAGTTTCTCCAAAAAAATTCTTGAAACTAAAGCAGCAAGCTG
TGGTTTTACAATGGCTTATGCATCTCAATGGATTGGCATAGAAAACTTTTCAGCATTACACAATATTCCTTTTGGGACGA
AAGAAAATGGCTTTAGCGGACTTAATTCAAAGCTTACCTTTAATGGGCCATTACAAGTGCGTATGTGGACTGACCTTAAA
AAATGGTCTGATCAAGGCATTTTCCGCTATGGTGGCCCTGCCGGCGCATTAGATGCAACACCAATGTTTATGACACAAAA
TTGTGCAATCTTTATGCAATCTTCAGGATCGCGTGCAGGTATCCTTTCTGAAGCAGTATTTAATGTTGGATTTGGTATGC
TCCCCTACTACGACAATGTAGAAGGTGCACCACAAAATTCAATTATTGGAGGAGCTTCGATTTGGGCTTTGAAAGGTCAT
ACCCCTGAAGAATATGCAGGTGCAGCTGCTTTTCTTAAATTTCTCTCAAAAGCTAATAATCAAGCTAAGTGGCACCAGAT
AACAGGTTATCTTCCAACTACAAAGGCTGCTTACGAACTAAGTAAAAAACAAGATTACTACAAAAAAAACGTTGGAGCAG
ATATTGCTATTAGACAGATTACTCTTAACCCACCAACCGTTAACTCAAAGGGTATCAGATTTGGTAATTTACCGCAAATT
CGTTCCATACTTGATCAAGAATTAGAAGCTGTACTCAATGGCTCAAAAACACCAAAAGATGGATTGGATGAAGCCGTTGA
GCGTGGGAATAAACTTCTCCGTGAATTTGAGAAAGCCAATCATTAA

Upstream 100 bases:

>100_bases
GGGTCAAAATATTTTTGGAATAATACTGTCACTGCATGTTCACGTGTAATACTATAAATTTGGTAAAATCCGTATTCCAT
CACTTTAGAAAGGGTGAACC

Downstream 100 bases:

>100_bases
GGTTTCATTATTGTTGTTAAAGATCAAAAACTCTACAAAACAGTTGAGTTTTTTTAATTCTTTTTTATTCACCTTTCTAA
AGTCTCTCTCTTTAAAGAGC

Product: glycerol-3-phosphate-binding periplasmic protein precursor ugpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSRFYLSIAAFTVAISVTTAGFAQTKISFWHSMSGELGKQTENLINDFNASQSEYKVIPSFRGEYEEGMISLISAFRGKQ
QPVLVQIYEIGTGTMMAAKGAIYPIYQLMKDTKQEFDPTDYLPAISGYYSDVQGRMLSMPFNASTPILYYNKDIFKKAGL
DPEQPPKTWQDVESFSKKILETKAASCGFTMAYASQWIGIENFSALHNIPFGTKENGFSGLNSKLTFNGPLQVRMWTDLK
KWSDQGIFRYGGPAGALDATPMFMTQNCAIFMQSSGSRAGILSEAVFNVGFGMLPYYDNVEGAPQNSIIGGASIWALKGH
TPEEYAGAAAFLKFLSKANNQAKWHQITGYLPTTKAAYELSKKQDYYKKNVGADIAIRQITLNPPTVNSKGIRFGNLPQI
RSILDQELEAVLNGSKTPKDGLDEAVERGNKLLREFEKANH

Sequences:

>Translated_441_residues
MSRFYLSIAAFTVAISVTTAGFAQTKISFWHSMSGELGKQTENLINDFNASQSEYKVIPSFRGEYEEGMISLISAFRGKQ
QPVLVQIYEIGTGTMMAAKGAIYPIYQLMKDTKQEFDPTDYLPAISGYYSDVQGRMLSMPFNASTPILYYNKDIFKKAGL
DPEQPPKTWQDVESFSKKILETKAASCGFTMAYASQWIGIENFSALHNIPFGTKENGFSGLNSKLTFNGPLQVRMWTDLK
KWSDQGIFRYGGPAGALDATPMFMTQNCAIFMQSSGSRAGILSEAVFNVGFGMLPYYDNVEGAPQNSIIGGASIWALKGH
TPEEYAGAAAFLKFLSKANNQAKWHQITGYLPTTKAAYELSKKQDYYKKNVGADIAIRQITLNPPTVNSKGIRFGNLPQI
RSILDQELEAVLNGSKTPKDGLDEAVERGNKLLREFEKANH
>Mature_440_residues
SRFYLSIAAFTVAISVTTAGFAQTKISFWHSMSGELGKQTENLINDFNASQSEYKVIPSFRGEYEEGMISLISAFRGKQQ
PVLVQIYEIGTGTMMAAKGAIYPIYQLMKDTKQEFDPTDYLPAISGYYSDVQGRMLSMPFNASTPILYYNKDIFKKAGLD
PEQPPKTWQDVESFSKKILETKAASCGFTMAYASQWIGIENFSALHNIPFGTKENGFSGLNSKLTFNGPLQVRMWTDLKK
WSDQGIFRYGGPAGALDATPMFMTQNCAIFMQSSGSRAGILSEAVFNVGFGMLPYYDNVEGAPQNSIIGGASIWALKGHT
PEEYAGAAAFLKFLSKANNQAKWHQITGYLPTTKAAYELSKKQDYYKKNVGADIAIRQITLNPPTVNSKGIRFGNLPQIR
SILDQELEAVLNGSKTPKDGLDEAVERGNKLLREFEKANH

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=418, Percent_Identity=50.9569377990431, Blast_Score=439, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48848; Mature: 48717

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFYLSIAAFTVAISVTTAGFAQTKISFWHSMSGELGKQTENLINDFNASQSEYKVIPS
CCEEEEEHHHHHHHEEHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCC
FRGEYEEGMISLISAFRGKQQPVLVQIYEIGTGTMMAAKGAIYPIYQLMKDTKQEFDPTD
CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHCCCHHHHHHHHHHHHHHCCCCC
YLPAISGYYSDVQGRMLSMPFNASTPILYYNKDIFKKAGLDPEQPPKTWQDVESFSKKIL
CCHHHHHHHHHHCCEEEECCCCCCCCEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ETKAASCGFTMAYASQWIGIENFSALHNIPFGTKENGFSGLNSKLTFNGPLQVRMWTDLK
HHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECHHH
KWSDQGIFRYGGPAGALDATPMFMTQNCAIFMQSSGSRAGILSEAVFNVGFGMLPYYDNV
HHCCCCCEEECCCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC
EGAPQNSIIGGASIWALKGHTPEEYAGAAAFLKFLSKANNQAKWHQITGYLPTTKAAYEL
CCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
SKKQDYYKKNVGADIAIRQITLNPPTVNSKGIRFGNLPQIRSILDQELEAVLNGSKTPKD
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
GLDEAVERGNKLLREFEKANH
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRFYLSIAAFTVAISVTTAGFAQTKISFWHSMSGELGKQTENLINDFNASQSEYKVIPS
CEEEEEHHHHHHHEEHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCC
FRGEYEEGMISLISAFRGKQQPVLVQIYEIGTGTMMAAKGAIYPIYQLMKDTKQEFDPTD
CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHCCCHHHHHHHHHHHHHHCCCCC
YLPAISGYYSDVQGRMLSMPFNASTPILYYNKDIFKKAGLDPEQPPKTWQDVESFSKKIL
CCHHHHHHHHHHCCEEEECCCCCCCCEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ETKAASCGFTMAYASQWIGIENFSALHNIPFGTKENGFSGLNSKLTFNGPLQVRMWTDLK
HHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECHHH
KWSDQGIFRYGGPAGALDATPMFMTQNCAIFMQSSGSRAGILSEAVFNVGFGMLPYYDNV
HHCCCCCEEECCCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC
EGAPQNSIIGGASIWALKGHTPEEYAGAAAFLKFLSKANNQAKWHQITGYLPTTKAAYEL
CCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
SKKQDYYKKNVGADIAIRQITLNPPTVNSKGIRFGNLPQIRSILDQELEAVLNGSKTPKD
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
GLDEAVERGNKLLREFEKANH
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]