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The map label for this gene is ugpA [H]

Identifier: 49474999

GI number: 49474999

Start: 254855

End: 255739

Strand: Reverse

Name: ugpA [H]

Synonym: BH01860

Alternate gene names: 49474999

Gene position: 255739-254855 (Counterclockwise)

Preceding gene: 49475000

Following gene: 49474998

Centisome position: 13.24

GC content: 36.84

Gene sequence:

>885_bases
ATGCAAGAAAAACATGCATATTTCAAAAATAGTCTACTTCCTTACTGGTTGCTTTTTCCTCAGCTCCTTGTGACTTTTTT
GTTTTTCTTTTGGCCTGCTATCCAAGCAATAAAATCGTCTTTTGAGCGTGAAGATCCTTTTGGCTTTACTACAACCTTTA
TTGGTTTTGAAAATTATGTTACAATTTTCTCTGATCTTGCTTATCTCAAATCGCTTCTTATAACCGCAATATTTTCCATT
TCGGTAACTGCCACTTCAATGACCATATCTCTTCTTTTGGCTGTCTGTGTTGATCGTGTCATCCGCGCAAAAAAAGCTTA
CACAACACTTTTGCTCTGGCCTTATGCTGTTGCTCCGGTATTGGCAGGTATATTATGGTTGTTTATCTTTCATCCAACTG
CCGGAATTGTCCCTTTTTTTCTCCAGAAAATAGGTATTATATGGAATTATCGTATTAATGGCATTCAAGCAATGATTATT
ATTGTGATTGCAGCCAGTTGGAAACAAATCTCTTATAATTTTCTCTTTTTTCTTGCCGGTCTTCAATCTGTTCCACGTTC
CCAAATAGAAGCAGCAGCAATTGATGGTGCTGGTCCTTTTAAACGATTTTGGACTGTGGTTTTTCCGCAAATTTCACCGA
CAACCTTTTTTCTTCTTATCGTTAACATCCAATATGTTATGTTTGATACATTTGGCATTATTGATAACATAACCTCTGGA
GGTCCTGCGCGTGCAACAAGCACTCTTGTCTACAAAGTGTACGATGATGGTTTTAAAAACCAAATAATTGGTGCATCAGC
AGCACAATCAACAATATTAATGTTGATGGTTATTGTCTTAACATTTATTCAGTTCCGCTGGATTGAACGCCGTGTACAAT
ATTAG

Upstream 100 bases:

>100_bases
TTATTGTTGTTAAAGATCAAAAACTCTACAAAACAGTTGAGTTTTTTTAATTCTTTTTTATTCACCTTTCTAAAGTCTCT
CTCTTTAAAGAGCTCTACGA

Downstream 100 bases:

>100_bases
GAAGAAAATCATGGTTGAAAATCGCCCTGTTTTAAAATTTCTAACCCATATAACCCTTATTATTGGCATTTTCATTATTT
GCTTTCCAGTTTATGTTGCT

Product: sn-glycerol-3-phosphate transport system permease protein ugpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MQEKHAYFKNSLLPYWLLFPQLLVTFLFFFWPAIQAIKSSFEREDPFGFTTTFIGFENYVTIFSDLAYLKSLLITAIFSI
SVTATSMTISLLLAVCVDRVIRAKKAYTTLLLWPYAVAPVLAGILWLFIFHPTAGIVPFFLQKIGIIWNYRINGIQAMII
IVIAASWKQISYNFLFFLAGLQSVPRSQIEAAAIDGAGPFKRFWTVVFPQISPTTFFLLIVNIQYVMFDTFGIIDNITSG
GPARATSTLVYKVYDDGFKNQIIGASAAQSTILMLMVIVLTFIQFRWIERRVQY

Sequences:

>Translated_294_residues
MQEKHAYFKNSLLPYWLLFPQLLVTFLFFFWPAIQAIKSSFEREDPFGFTTTFIGFENYVTIFSDLAYLKSLLITAIFSI
SVTATSMTISLLLAVCVDRVIRAKKAYTTLLLWPYAVAPVLAGILWLFIFHPTAGIVPFFLQKIGIIWNYRINGIQAMII
IVIAASWKQISYNFLFFLAGLQSVPRSQIEAAAIDGAGPFKRFWTVVFPQISPTTFFLLIVNIQYVMFDTFGIIDNITSG
GPARATSTLVYKVYDDGFKNQIIGASAAQSTILMLMVIVLTFIQFRWIERRVQY
>Mature_294_residues
MQEKHAYFKNSLLPYWLLFPQLLVTFLFFFWPAIQAIKSSFEREDPFGFTTTFIGFENYVTIFSDLAYLKSLLITAIFSI
SVTATSMTISLLLAVCVDRVIRAKKAYTTLLLWPYAVAPVLAGILWLFIFHPTAGIVPFFLQKIGIIWNYRINGIQAMII
IVIAASWKQISYNFLFFLAGLQSVPRSQIEAAAIDGAGPFKRFWTVVFPQISPTTFFLLIVNIQYVMFDTFGIIDNITSG
GPARATSTLVYKVYDDGFKNQIIGASAAQSTILMLMVIVLTFIQFRWIERRVQY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=50.6802721088435, Blast_Score=299, Evalue=1e-82,
Organism=Escherichia coli, GI1790465, Length=274, Percent_Identity=25.1824817518248, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1787570, Length=256, Percent_Identity=28.515625, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33471; Mature: 33471

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEKHAYFKNSLLPYWLLFPQLLVTFLFFFWPAIQAIKSSFEREDPFGFTTTFIGFENYV
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TIFSDLAYLKSLLITAIFSISVTATSMTISLLLAVCVDRVIRAKKAYTTLLLWPYAVAPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGILWLFIFHPTAGIVPFFLQKIGIIWNYRINGIQAMIIIVIAASWKQISYNFLFFLAG
HHHHHHHHHHCCCCHHHHHHHHHHCHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSVPRSQIEAAAIDGAGPFKRFWTVVFPQISPTTFFLLIVNIQYVMFDTFGIIDNITSG
HHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPARATSTLVYKVYDDGFKNQIIGASAAQSTILMLMVIVLTFIQFRWIERRVQY
CCCCHHHHEEEEEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQEKHAYFKNSLLPYWLLFPQLLVTFLFFFWPAIQAIKSSFEREDPFGFTTTFIGFENYV
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TIFSDLAYLKSLLITAIFSISVTATSMTISLLLAVCVDRVIRAKKAYTTLLLWPYAVAPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGILWLFIFHPTAGIVPFFLQKIGIIWNYRINGIQAMIIIVIAASWKQISYNFLFFLAG
HHHHHHHHHHCCCCHHHHHHHHHHCHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSVPRSQIEAAAIDGAGPFKRFWTVVFPQISPTTFFLLIVNIQYVMFDTFGIIDNITSG
HHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPARATSTLVYKVYDDGFKNQIIGASAAQSTILMLMVIVLTFIQFRWIERRVQY
CCCCHHHHEEEEEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]