| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
Click here to switch to the map view.
The map label for this gene is hslO [H]
Identifier: 49474926
GI number: 49474926
Start: 146540
End: 147550
Strand: Reverse
Name: hslO [H]
Synonym: BH01080
Alternate gene names: 49474926
Gene position: 147550-146540 (Counterclockwise)
Preceding gene: 49474927
Following gene: 49474923
Centisome position: 7.64
GC content: 38.48
Gene sequence:
>1011_bases ATGAGCGAAGAACGCGAACAAGCCAAAGATGAAGCCTCTCTCAACAACATCTACTTGAGTGAAGATGATACTGTTATTCC CTTTCAAATCGAAGAACTTGATATTCGTGGACGTGCTGTACAATTTGGAAAAGCTTTAGATTCTATTCTCACAAGACATC AATATCCTGAACCGGTTTCTTACCTTCTAGCAGAGGCTTTAGTTTTAACTGTTCTGCTTGGAAGCTCCTTAAAACTTAAA GGAAAATTTATTTTACAAACCCATTCCAATGGACCAATTAATATGTTGGTGTGTGATTTTTCTCCCCCTTTCAGTCTACG CGGGTACGCTCGTTTTGATGAAGAAAAACTGAAACAAGCAATAGCCAATAATCAAATATCTTCCGAAACACTTCTAGGAA AAGGTACTTTAGCCTTCACCATCCGCCAAGGCGCCCATACACAAGACTATCAGGGAATAGTTGCATTAGAAGGATCAAAT TTACAAGAAGCTACCCGTGCCTATTTTGACCAATCGGAACAAATTCTCACCGATATCCGTTTAGCAGTCGCTATATTGAT TAACCGCGACCAAAAAGGAAAGCAGCAGAAAAGCTGGCGAGCAGGAGGTATTTTGACTCAACTTTTGCCCCAAGCATCAT CTCATCATAAAATATATGAACCCAATAAAAAACCACAAGAAACGAAAACTCGTGCTCAACTTGAAAATCAATGGAAAGAA GCTAAAGCACTAACGTCGACAATTGAAAGTACAGAATTAACAGATCCTCAAATCGGCAGTAAGCGGCTTTTATTCCGTCT TTTCCACGAACAAGGTGTTAGAGTTTTTAATCCTATTTCTCTTGTAGATCAATGCTCCTGTTCGCGCGAAAAAATTAAAG AAATACTGGAAGGTTTTCCCCCTGAAGAACGCAATCAAATGGTTAAAGATAAATATATTTCTGTCACATGTGAATTTTGC TCAACAACTTATCGTTTTAAACCGCTAGAATTTCCTGAAAATAAAACGTGA
Upstream 100 bases:
>100_bases TTGTCTTCATGCCCAAAAAACAATTCTTGTATGATGTTTACAAGATGCATTTTTCTCTCCACAATAGTCTGCAAAAATAA ATCCTATAAAAGGCAAAAAT
Downstream 100 bases:
>100_bases TAAATATTCTTCACAAATAAGTACTTACTAAATAAATAAGTACATATTAATTACAACTAAAGCCCATTTATTATGTCTTG AAAACCTAAAAACAGAAAGC
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSEEREQAKDEASLNNIYLSEDDTVIPFQIEELDIRGRAVQFGKALDSILTRHQYPEPVSYLLAEALVLTVLLGSSLKLK GKFILQTHSNGPINMLVCDFSPPFSLRGYARFDEEKLKQAIANNQISSETLLGKGTLAFTIRQGAHTQDYQGIVALEGSN LQEATRAYFDQSEQILTDIRLAVAILINRDQKGKQQKSWRAGGILTQLLPQASSHHKIYEPNKKPQETKTRAQLENQWKE AKALTSTIESTELTDPQIGSKRLLFRLFHEQGVRVFNPISLVDQCSCSREKIKEILEGFPPEERNQMVKDKYISVTCEFC STTYRFKPLEFPENKT
Sequences:
>Translated_336_residues MSEEREQAKDEASLNNIYLSEDDTVIPFQIEELDIRGRAVQFGKALDSILTRHQYPEPVSYLLAEALVLTVLLGSSLKLK GKFILQTHSNGPINMLVCDFSPPFSLRGYARFDEEKLKQAIANNQISSETLLGKGTLAFTIRQGAHTQDYQGIVALEGSN LQEATRAYFDQSEQILTDIRLAVAILINRDQKGKQQKSWRAGGILTQLLPQASSHHKIYEPNKKPQETKTRAQLENQWKE AKALTSTIESTELTDPQIGSKRLLFRLFHEQGVRVFNPISLVDQCSCSREKIKEILEGFPPEERNQMVKDKYISVTCEFC STTYRFKPLEFPENKT >Mature_335_residues SEEREQAKDEASLNNIYLSEDDTVIPFQIEELDIRGRAVQFGKALDSILTRHQYPEPVSYLLAEALVLTVLLGSSLKLKG KFILQTHSNGPINMLVCDFSPPFSLRGYARFDEEKLKQAIANNQISSETLLGKGTLAFTIRQGAHTQDYQGIVALEGSNL QEATRAYFDQSEQILTDIRLAVAILINRDQKGKQQKSWRAGGILTQLLPQASSHHKIYEPNKKPQETKTRAQLENQWKEA KALTSTIESTELTDPQIGSKRLLFRLFHEQGVRVFNPISLVDQCSCSREKIKEILEGFPPEERNQMVKDKYISVTCEFCS TTYRFKPLEFPENKT
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=307, Percent_Identity=30.2931596091205, Blast_Score=143, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 38156; Mature: 38025
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEREQAKDEASLNNIYLSEDDTVIPFQIEELDIRGRAVQFGKALDSILTRHQYPEPVS CCCHHHHHHHHHCCCCEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHH YLLAEALVLTVLLGSSLKLKGKFILQTHSNGPINMLVCDFSPPFSLRGYARFDEEKLKQA HHHHHHHHHHHHHCCCEEECEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHH IANNQISSETLLGKGTLAFTIRQGAHTQDYQGIVALEGSNLQEATRAYFDQSEQILTDIR HHCCCCCCHHEECCCEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHH LAVAILINRDQKGKQQKSWRAGGILTQLLPQASSHHKIYEPNKKPQETKTRAQLENQWKE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AKALTSTIESTELTDPQIGSKRLLFRLFHEQGVRVFNPISLVDQCSCSREKIKEILEGFP HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHCCCHHHHHHHHHCCC PEERNQMVKDKYISVTCEFCSTTYRFKPLEFPENKT CHHHHHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SEEREQAKDEASLNNIYLSEDDTVIPFQIEELDIRGRAVQFGKALDSILTRHQYPEPVS CCHHHHHHHHHCCCCEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHH YLLAEALVLTVLLGSSLKLKGKFILQTHSNGPINMLVCDFSPPFSLRGYARFDEEKLKQA HHHHHHHHHHHHHCCCEEECEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHH IANNQISSETLLGKGTLAFTIRQGAHTQDYQGIVALEGSNLQEATRAYFDQSEQILTDIR HHCCCCCCHHEECCCEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHH LAVAILINRDQKGKQQKSWRAGGILTQLLPQASSHHKIYEPNKKPQETKTRAQLENQWKE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AKALTSTIESTELTDPQIGSKRLLFRLFHEQGVRVFNPISLVDQCSCSREKIKEILEGFP HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHCCCHHHHHHHHHCCC PEERNQMVKDKYISVTCEFCSTTYRFKPLEFPENKT CHHHHHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA