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The map label for this gene is bioY [H]

Identifier: 49186424

GI number: 49186424

Start: 3391682

End: 3392257

Strand: Reverse

Name: bioY [H]

Synonym: BAS3420

Alternate gene names: 49186424

Gene position: 3392257-3391682 (Counterclockwise)

Preceding gene: 49186425

Following gene: 49186423

Centisome position: 64.88

GC content: 36.46

Gene sequence:

>576_bases
ATGAATACAAAAAACTTAGTTTTCGTCGCTTTATTTAGTTCTATTATGGGAGTGTTAGGGTTAATACCTCCAATTGCTCT
TTCTATTACACCAGTTCCAATTACATTACAATCACTTGGTGTTATGCTTGCTGGTGGATTGTTAGGATCACGTCTTGGTG
CATTAAGCCAGCTTATTTTTTTACTTATTGTAGGAGTTGGAGCGCCATTACTTGCTGGTGGACGTGGTGGCTTTGGCGTA
TTTGTTGGGCCAAGTGCAGGATATTTACTTGGTTATATCGTTGGAGCATTTGTCATTGGTTACTTAATTGAGCATCTACG
TGAAGTTTCTATTATAAAAGTATTATGCATTAATATAATTGGTGGTATTTTCGTAGTTTATGTATTTGGTATTACTGTAC
AAGCTTTCTTAATGGGTGTTTCCGTGTGGGAGACGATGAAAGTGAGTGCTGTGTTTTTACCAGGAGATTGCATAAAAGCT
ATTATTGCAGCGATTCTTGTAACGAAATTACATCGTTCATTGAAACATATTATTACGCCTGCTCTAAAGAATGGGAAATA
TACAAATGCGGGATAA

Upstream 100 bases:

>100_bases
TAAAGAAAACGAGTTGACAAAAGCTAAATAGAAAGATAATATATCTCCTATAATATGTTACCTAAAAACCATTTTAAGTT
TACAAATAGGAGAAGTAAAT

Downstream 100 bases:

>100_bases
GAAAGAGAAGAAACACGTTTATTGCGTGTTTCTTTTTAGTATTTTGTAAAGAAAGGACATCTCATATGGGAATAACAAAA
GAATATAAAAAACATGCCTC

Product: bioY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNTKNLVFVALFSSIMGVLGLIPPIALSITPVPITLQSLGVMLAGGLLGSRLGALSQLIFLLIVGVGAPLLAGGRGGFGV
FVGPSAGYLLGYIVGAFVIGYLIEHLREVSIIKVLCINIIGGIFVVYVFGITVQAFLMGVSVWETMKVSAVFLPGDCIKA
IIAAILVTKLHRSLKHIITPALKNGKYTNAG

Sequences:

>Translated_191_residues
MNTKNLVFVALFSSIMGVLGLIPPIALSITPVPITLQSLGVMLAGGLLGSRLGALSQLIFLLIVGVGAPLLAGGRGGFGV
FVGPSAGYLLGYIVGAFVIGYLIEHLREVSIIKVLCINIIGGIFVVYVFGITVQAFLMGVSVWETMKVSAVFLPGDCIKA
IIAAILVTKLHRSLKHIITPALKNGKYTNAG
>Mature_191_residues
MNTKNLVFVALFSSIMGVLGLIPPIALSITPVPITLQSLGVMLAGGLLGSRLGALSQLIFLLIVGVGAPLLAGGRGGFGV
FVGPSAGYLLGYIVGAFVIGYLIEHLREVSIIKVLCINIIGGIFVVYVFGITVQAFLMGVSVWETMKVSAVFLPGDCIKA
IIAAILVTKLHRSLKHIITPALKNGKYTNAG

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19919; Mature: 19919

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKNLVFVALFSSIMGVLGLIPPIALSITPVPITLQSLGVMLAGGLLGSRLGALSQLIF
CCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIVGVGAPLLAGGRGGFGVFVGPSAGYLLGYIVGAFVIGYLIEHLREVSIIKVLCINII
HHHHHHCCHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIFVVYVFGITVQAFLMGVSVWETMKVSAVFLPGDCIKAIIAAILVTKLHRSLKHIITP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKNGKYTNAG
HHCCCCCCCCC
>Mature Secondary Structure
MNTKNLVFVALFSSIMGVLGLIPPIALSITPVPITLQSLGVMLAGGLLGSRLGALSQLIF
CCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIVGVGAPLLAGGRGGFGVFVGPSAGYLLGYIVGAFVIGYLIEHLREVSIIKVLCINII
HHHHHHCCHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIFVVYVFGITVQAFLMGVSVWETMKVSAVFLPGDCIKAIIAAILVTKLHRSLKHIITP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKNGKYTNAG
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]