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The map label for this gene is yaaH [H]

Identifier: 49186406

GI number: 49186406

Start: 3374752

End: 3376044

Strand: Direct

Name: yaaH [H]

Synonym: BAS3402

Alternate gene names: 49186406

Gene position: 3374752-3376044 (Clockwise)

Preceding gene: 49186404

Following gene: 49186410

Centisome position: 64.54

GC content: 38.21

Gene sequence:

>1293_bases
ATGATTCAAATTGTAACGGTTCGTAGCGGTGATAGCGTATATAGCTTGGCATCAAAATATGGATCAACACCTGACGAGAT
AGTAAAAGACAACGGACTAAATCCAGCTGAAACACTCGTTGTTGGTCAGGCACTAATTGTGAATACGAAAGGAAATAATT
ACTATGTACAGCCTGGCGATAGCTTATATCGAATCTCTCAAACATACAACGTTCCTCTCGCTAGTTTAGCTAAAGTGAAT
AACTTATCTTTAAAATCCATTCTCCATGTTGGACAGCAATTATATATACCGAAAGGGACGAAACGAGCAGTAGAATCCAT
CGCTTATTTACAACCTTCAACTATCCCCATTAAAGAAAGTTTAGTTAATGCTACACGTGCTATTAATCCATTTTTAACAT
ATTTAGCCTACTTCAGTTTCGAGGCAAAAAGAGATGGTACGTTAAAAGAACCAACTGAAACAGCTAAAATTGCTAATATT
GCAACGCAAGGCAACACCATTCCTATGCTCGTTATTACGAACATCGAAAATGGAAATTTCAGTGCCGATCTGACATCAGT
TATTTTACGGGACGCAACAATTCAAAACAAATTTATTACAAACATTTTGCAAACAGCTGAGAAGTACGGTATGCGAGACA
TTCATTTTGATTTTGAGAGCGTGGCACCTGAAGATCGCGAAGCGTATAATCGTTTTTTACGAAATGTGAAAACACGCTTA
CCTAGCGGGTACACATTAAGTACAACACTTGTACCGAAAACAAGTTCAAATCAAAAGGGAAAATTTTTCGAAACTCACGA
TTATAAAGCACAAGGTCAAATTGTTGATTTCGTCGTCATTATGACATACGACTGGGGTTGGCAGGGCGGCCCGCCGATGG
CTATTTCTCCTATCGGTCCTGTAAAAGAAGTACTTCAATACGCAAAATCTCAAATGCCTCCGCAAAAAATTATGATGGGA
CAAAATTTATACGGATTCGATTGGAAACTTCCATTCAAAGAAGGAAATCCGCCTGCAAAAGCAATTAGCTCTGTCGCAGC
TGTTGCACTAGCTCGTAAATACAATGTTCCGATCCGCTATGATTTCACAGCACAGGCTCCTCATTTTAATTATTTCGATG
AAAATGGTGTACAACACGAAGTTTGGTTTGAAGATTCACGGTCTGTTCAAAGTAAGTTTAATTTAATGAAAGAACAAGGT
ATAGGTGGTATTAGTTATTGGAAGATTGGTTTACCATTCCCGCAAAATTGGCGTTTACTTGTTGAAAACTTTACGATTAC
GAAAAAGGGCTGA

Upstream 100 bases:

>100_bases
CCTTCTTTCACTTCTGCTACCTTGCATACATTTAATCATAATACAGCGGAATCAAAAATAAAATAAAAACAGTGAATCTT
TTACCGAAAGGAGCAAGCAT

Downstream 100 bases:

>100_bases
CAAAAGTCAGCCCTTTTTGTACATTCTGTTAAGATTCATCTTTGATTTCACTTTTTAATGAGTCAATACTTTCTAAACGT
CTTTGATTTTTTGCTTCAAT

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MIQIVTVRSGDSVYSLASKYGSTPDEIVKDNGLNPAETLVVGQALIVNTKGNNYYVQPGDSLYRISQTYNVPLASLAKVN
NLSLKSILHVGQQLYIPKGTKRAVESIAYLQPSTIPIKESLVNATRAINPFLTYLAYFSFEAKRDGTLKEPTETAKIANI
ATQGNTIPMLVITNIENGNFSADLTSVILRDATIQNKFITNILQTAEKYGMRDIHFDFESVAPEDREAYNRFLRNVKTRL
PSGYTLSTTLVPKTSSNQKGKFFETHDYKAQGQIVDFVVIMTYDWGWQGGPPMAISPIGPVKEVLQYAKSQMPPQKIMMG
QNLYGFDWKLPFKEGNPPAKAISSVAAVALARKYNVPIRYDFTAQAPHFNYFDENGVQHEVWFEDSRSVQSKFNLMKEQG
IGGISYWKIGLPFPQNWRLLVENFTITKKG

Sequences:

>Translated_430_residues
MIQIVTVRSGDSVYSLASKYGSTPDEIVKDNGLNPAETLVVGQALIVNTKGNNYYVQPGDSLYRISQTYNVPLASLAKVN
NLSLKSILHVGQQLYIPKGTKRAVESIAYLQPSTIPIKESLVNATRAINPFLTYLAYFSFEAKRDGTLKEPTETAKIANI
ATQGNTIPMLVITNIENGNFSADLTSVILRDATIQNKFITNILQTAEKYGMRDIHFDFESVAPEDREAYNRFLRNVKTRL
PSGYTLSTTLVPKTSSNQKGKFFETHDYKAQGQIVDFVVIMTYDWGWQGGPPMAISPIGPVKEVLQYAKSQMPPQKIMMG
QNLYGFDWKLPFKEGNPPAKAISSVAAVALARKYNVPIRYDFTAQAPHFNYFDENGVQHEVWFEDSRSVQSKFNLMKEQG
IGGISYWKIGLPFPQNWRLLVENFTITKKG
>Mature_430_residues
MIQIVTVRSGDSVYSLASKYGSTPDEIVKDNGLNPAETLVVGQALIVNTKGNNYYVQPGDSLYRISQTYNVPLASLAKVN
NLSLKSILHVGQQLYIPKGTKRAVESIAYLQPSTIPIKESLVNATRAINPFLTYLAYFSFEAKRDGTLKEPTETAKIANI
ATQGNTIPMLVITNIENGNFSADLTSVILRDATIQNKFITNILQTAEKYGMRDIHFDFESVAPEDREAYNRFLRNVKTRL
PSGYTLSTTLVPKTSSNQKGKFFETHDYKAQGQIVDFVVIMTYDWGWQGGPPMAISPIGPVKEVLQYAKSQMPPQKIMMG
QNLYGFDWKLPFKEGNPPAKAISSVAAVALARKYNVPIRYDFTAQAPHFNYFDENGVQHEVWFEDSRSVQSKFNLMKEQG
IGGISYWKIGLPFPQNWRLLVENFTITKKG

Specific function: May be required for the L-alanine-stimulated germination pathway [H]

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF00704 Glyco_hydro_18; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 48170; Mature: 48170

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIVTVRSGDSVYSLASKYGSTPDEIVKDNGLNPAETLVVGQALIVNTKGNNYYVQPGD
CEEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHEECEEEEEEECCCEEEECCCC
SLYRISQTYNVPLASLAKVNNLSLKSILHVGQQLYIPKGTKRAVESIAYLQPSTIPIKES
CEEEEEHCCCCCHHHHHHHCCCHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCHHHH
LVNATRAINPFLTYLAYFSFEAKRDGTLKEPTETAKIANIATQGNTIPMLVITNIENGNF
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHEEECCCEEEEEEEEECCCCCC
SADLTSVILRDATIQNKFITNILQTAEKYGMRDIHFDFESVAPEDREAYNRFLRNVKTRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCHHHHHHHHHHHHHHHC
PSGYTLSTTLVPKTSSNQKGKFFETHDYKAQGQIVDFVVIMTYDWGWQGGPPMAISPIGP
CCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCEEECCCCH
VKEVLQYAKSQMPPQKIMMGQNLYGFDWKLPFKEGNPPAKAISSVAAVALARKYNVPIRY
HHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
DFTAQAPHFNYFDENGVQHEVWFEDSRSVQSKFNLMKEQGIGGISYWKIGLPFPQNWRLL
EEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEE
VENFTITKKG
EEEEEEEECC
>Mature Secondary Structure
MIQIVTVRSGDSVYSLASKYGSTPDEIVKDNGLNPAETLVVGQALIVNTKGNNYYVQPGD
CEEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHEECEEEEEEECCCEEEECCCC
SLYRISQTYNVPLASLAKVNNLSLKSILHVGQQLYIPKGTKRAVESIAYLQPSTIPIKES
CEEEEEHCCCCCHHHHHHHCCCHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCHHHH
LVNATRAINPFLTYLAYFSFEAKRDGTLKEPTETAKIANIATQGNTIPMLVITNIENGNF
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHEEECCCEEEEEEEEECCCCCC
SADLTSVILRDATIQNKFITNILQTAEKYGMRDIHFDFESVAPEDREAYNRFLRNVKTRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCHHHHHHHHHHHHHHHC
PSGYTLSTTLVPKTSSNQKGKFFETHDYKAQGQIVDFVVIMTYDWGWQGGPPMAISPIGP
CCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCEEECCCCH
VKEVLQYAKSQMPPQKIMMGQNLYGFDWKLPFKEGNPPAKAISSVAAVALARKYNVPIRY
HHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
DFTAQAPHFNYFDENGVQHEVWFEDSRSVQSKFNLMKEQGIGGISYWKIGLPFPQNWRLL
EEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEE
VENFTITKKG
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 10419957 [H]