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The map label for this gene is yneR [H]

Identifier: 49186404

GI number: 49186404

Start: 3373906

End: 3374196

Strand: Direct

Name: yneR [H]

Synonym: BAS3400

Alternate gene names: 49186404

Gene position: 3373906-3374196 (Clockwise)

Preceding gene: 49186403

Following gene: 49186406

Centisome position: 64.53

GC content: 34.02

Gene sequence:

>291_bases
ATGAATCTTTCCGTAACAAAAGAAGCAGCACAATGGTATAAAAACGAATTAAACTTACAATCAGGTGAAACACTACGCTT
TTTCGTACAATACGGTGGTTGCAGTACTGTGCAAAAAGGACTTTCTTTAGGTATTCGTAAAGATGATCCTGCACACCCTA
CTGTTCAAATTCAAGAAGAAGATATTAACTTCTTTATTGAAAGCGATGATGAGTGGTTCTTCGATGGACATAATTTAGTT
GTTACATTTAACGATGGTGATGATTTCCCGCAATTTAATTATGAAAAATAA

Upstream 100 bases:

>100_bases
CCCACATAACGCAAAAAGAAAACGTGAAGCATATTAATAGCGTCTTTTTGCGTTATTTTTTATACTAAAGAAAAAGCAAC
ATAATTTGGAGGAACTATAC

Downstream 100 bases:

>100_bases
AAAAACGTGGCTTCTGCCACGCTTTTTTATTTTTTCTTGATTTCCTCATATTTCGCATACCACTCTGGATAGAACTTTTT
AAATGATACAGGGCGGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTVQIQEEDINFFIESDDEWFFDGHNLV
VTFNDGDDFPQFNYEK

Sequences:

>Translated_96_residues
MNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTVQIQEEDINFFIESDDEWFFDGHNLV
VTFNDGDDFPQFNYEK
>Mature_96_residues
MNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTVQIQEEDINFFIESDDEWFFDGHNLV
VTFNDGDDFPQFNYEK

Specific function: Unknown

COG id: COG4841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR008326 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 11115; Mature: 11115

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTVQIQEE
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEEEEC
DINFFIESDDEWFFDGHNLVVTFNDGDDFPQFNYEK
CEEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNLSVTKEAAQWYKNELNLQSGETLRFFVQYGGCSTVQKGLSLGIRKDDPAHPTVQIQEE
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEEEEC
DINFFIESDDEWFFDGHNLVVTFNDGDDFPQFNYEK
CEEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]