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The map label for this gene is rapI [H]

Identifier: 49186313

GI number: 49186313

Start: 3274620

End: 3275294

Strand: Direct

Name: rapI [H]

Synonym: BAS3308

Alternate gene names: 49186313

Gene position: 3274620-3275294 (Clockwise)

Preceding gene: 49186312

Following gene: 49186314

Centisome position: 62.63

GC content: 29.63

Gene sequence:

>675_bases
ATGAACGTTCAACTACAAGGTAATGAACAAATTACAAAATTATTTAATGACTGGTATTTAGCCATGCTAAAACAAGATGT
GTCCCAGGCAACAAACTTAAAGCATGAAATTGAGGAAAAGGAACTAAATTTTGAAGAAGATGAAAACTTAGCATTATATT
ATTCCTTACTAGACTTTCGATATAAAGTTTTAGTAGATAGTTTAAGTATTTCAAAAGATTGTTTTGATAAAATAGATTCT
TACTTAATCTCATCCAACCATCCACTGGCTTACTACTATCACTTCTTTAAAGGCATTTATGCAACTTTAACCACAGACTT
TAACTTAGCTAGCGAACATTATGAACAAGCTAAGTTATTACTAGTAAATAACACTGATAATCTAGAGCATGCTGAATTTT
ATTATCGAATGGCGATTTTCCATTATCACTTTTATCAACCAATTGAATCCATTGAATATGCAACTAAGGCTAAAGCGATT
TTCGATAAACATACTGGCTACGAAGTTAAAGTTGGATTATGCAAAAATACATTAGGTGCCTCATTTGTATATTTAAAACA
ATATGAACAAGCGGAAGAACAATATAATTCAGCAATACACCTTTTACAAAAATCTAATGAAAAAGAATTAATTTTAAGTG
TACGTAATAATTTGGGTTGGTTATATGCGAGTTAA

Upstream 100 bases:

>100_bases
AGTTTGTTAAACAAATATTGAGAAATAAAAATCATATTTCTAAATATTGTTATTTTTGATACTATATTTTATAAGAATAT
TCAAAAAGCGAGGGGATTTC

Downstream 100 bases:

>100_bases
AACCTCTCCACACTCGCAATCCGTCACCTATCAGAAGTAACTGAAAAGAAACCTACACATTTCAAAGCTCTCTTCTTGCA
AGCAAGAGAACACTCTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFRYKVLVDSLSISKDCFDKIDS
YLISSNHPLAYYYHFFKGIYATLTTDFNLASEHYEQAKLLLVNNTDNLEHAEFYYRMAIFHYHFYQPIESIEYATKAKAI
FDKHTGYEVKVGLCKNTLGASFVYLKQYEQAEEQYNSAIHLLQKSNEKELILSVRNNLGWLYAS

Sequences:

>Translated_224_residues
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFRYKVLVDSLSISKDCFDKIDS
YLISSNHPLAYYYHFFKGIYATLTTDFNLASEHYEQAKLLLVNNTDNLEHAEFYYRMAIFHYHFYQPIESIEYATKAKAI
FDKHTGYEVKVGLCKNTLGASFVYLKQYEQAEEQYNSAIHLLQKSNEKELILSVRNNLGWLYAS
>Mature_224_residues
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFRYKVLVDSLSISKDCFDKIDS
YLISSNHPLAYYYHFFKGIYATLTTDFNLASEHYEQAKLLLVNNTDNLEHAEFYYRMAIFHYHFYQPIESIEYATKAKAI
FDKHTGYEVKVGLCKNTLGASFVYLKQYEQAEEQYNSAIHLLQKSNEKELILSVRNNLGWLYAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 26407; Mature: 26407

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFR
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEEHHHHHHH
YKVLVDSLSISKDCFDKIDSYLISSNHPLAYYYHFFKGIYATLTTDFNLASEHYEQAKLL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEE
LVNNTDNLEHAEFYYRMAIFHYHFYQPIESIEYATKAKAIFDKHTGYEVKVGLCKNTLGA
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
SFVYLKQYEQAEEQYNSAIHLLQKSNEKELILSVRNNLGWLYAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCEEEEC
>Mature Secondary Structure
MNVQLQGNEQITKLFNDWYLAMLKQDVSQATNLKHEIEEKELNFEEDENLALYYSLLDFR
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEEHHHHHHH
YKVLVDSLSISKDCFDKIDSYLISSNHPLAYYYHFFKGIYATLTTDFNLASEHYEQAKLL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEE
LVNNTDNLEHAEFYYRMAIFHYHFYQPIESIEYATKAKAIFDKHTGYEVKVGLCKNTLGA
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
SFVYLKQYEQAEEQYNSAIHLLQKSNEKELILSVRNNLGWLYAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]