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The map label for this gene is ntdA [H]

Identifier: 49186052

GI number: 49186052

Start: 3019295

End: 3019714

Strand: Reverse

Name: ntdA [H]

Synonym: BAS3047

Alternate gene names: 49186052

Gene position: 3019714-3019295 (Counterclockwise)

Preceding gene: 49186053

Following gene: 49186051

Centisome position: 57.75

GC content: 29.52

Gene sequence:

>420_bases
TTGCAAGCAGCTATTGGTTTGGAAAGAATTAAGTATTTATCATACAACAATTTAAAAAGAGCGTATTTAGCTCAACGATA
TATTCGTGAGTTAAAGGATTTAGAGGATAGAGAATTAATAAAGCTACCTATGATGACAGAAGATAATGTCTGGCACCTTT
TTCCGATTAGAGTTGAAAATGGAAGAAGAGACGAGTTGAAAAATAAATTGTACCAATTGTATAACATTGAAACAGATATT
TATTATCCGGTATTATCTCATAAACAAAATACTAAGTGGTTAAAGGAAAATGATTTGCAAAACAATATGTTCAATACAGA
GCAAGTTCATAAAGAAATATTACATCTACCTTTACATCCAAATATGATGTTAGAAGAGCAAAATTTCGTTTTGGAGGGAT
TATTCAATGTCAATAAGTAA

Upstream 100 bases:

>100_bases
ATCTTGCAATACGTTGCAATCAATATAGTTATCATGGATTTGAAATTGATAAAAAAATAAAAAGGTATTAGACTTTGGAT
TCAATTCTAAAATTGATAAT

Downstream 100 bases:

>100_bases
TGAAGTTTTGAAGTCTTTAAATTTTGAAAGACTACCACAGGTTAAAAACCCGAAATATGTAGTGTTCTGTGATTTTGATG
AAACTTATTATCCTCATAGC

Product: DegT/DnrJ/EryC1/StrS aminotransferase family protein, C-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MQAAIGLERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVENGRRDELKNKLYQLYNIETDI
YYPVLSHKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHPNMMLEEQNFVLEGLFNVNK

Sequences:

>Translated_139_residues
MQAAIGLERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVENGRRDELKNKLYQLYNIETDI
YYPVLSHKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHPNMMLEEQNFVLEGLFNVNK
>Mature_139_residues
MQAAIGLERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVENGRRDELKNKLYQLYNIETDI
YYPVLSHKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHPNMMLEEQNFVLEGLFNVNK

Specific function: Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 16920; Mature: 16920

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAAIGLERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVEN
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEEEECC
GRRDELKNKLYQLYNIETDIYYPVLSHKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHP
CCHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
NMMLEEQNFVLEGLFNVNK
CEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MQAAIGLERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVEN
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEEEECC
GRRDELKNKLYQLYNIETDIYYPVLSHKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHP
CCHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
NMMLEEQNFVLEGLFNVNK
CEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]