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The map label for this gene is yrhO [H]

Identifier: 49184613

GI number: 49184613

Start: 1618815

End: 1619651

Strand: Direct

Name: yrhO [H]

Synonym: BAS1598

Alternate gene names: 49184613

Gene position: 1618815-1619651 (Clockwise)

Preceding gene: 49184612

Following gene: 49184614

Centisome position: 30.96

GC content: 36.32

Gene sequence:

>837_bases
ATGGATGAAATTATAAAGGAATTACAAAAGTTAGGATTTTCCCAGTACGAATGTAAAGCGTATATTGGACTACTAAAACA
TTCCCCAGTAACAGGTTATGAAGTGAGTAAACAAACAGGAGTACCTCGTTCTATGATTTACGAGGTACTCGGAAAGTTAA
TGGATAAAGGAGCAGTACATATTGTACCTTCTGAACCAGTTAAATATGTACCAGTACCAGCTACCGAATTAATGAATCGA
ATGCGAAAAGACTTTGAGAAGTCCTTTGAATTTTTAGATGAGAAATTAAATGGTTTAGAACAAGAGAGACAAATAGATGT
AATTTCGCATATTCGCTCAAATGATCGTGTTTTAAAAGAAATTTGCAATATAATTAATAGAGCAAAGGAAGAGTTATGGA
TTTCTGTATGGGAAGATCAAGTGCATGAAATTGAGCCATACATTCATCAAAAAGAAGAGGAAGGCGTACATATATTTTCA
ATCTTATTTGGCGCGCCAGAAACCAAAATAGGCGCGACGTTTCACCATAATTATATGACACCTCACGTTGTTGAAAAGAG
AATGGGTGGTCATTTAACTGTTATTGCTCGTGACGGGGAAGAAGTATTAATTGCGAACTTCTCAAATGATAGCACTTCGT
GGGCTGTTACAACGTATGACCCAGCATTAGTTCTCGTTGCTACAGAGTATGTGCGACACGATATTATGGTTGAAGAAATT
ACGAAGGAATTTGGAGCTGATAAGTTAGATACGTTATGGCGTGAAAATATAGATTTAGTTCATGTCGTAACAGGAAAACG
AACTATGGAAGGAATGGAGGATGATAAGGATGAGTAA

Upstream 100 bases:

>100_bases
CGAGTGAAATAGGAACACTTGTTATTGATAAAGTAAAAAGTAAAGGGAAGCAAAATCGTCGCTTTGAAGTTAGAGCGATC
TAGATTGCGAGGGGTTACCG

Downstream 100 bases:

>100_bases
AGCTGAGGCACATGTAGCTTTGCAGAGCGATGATACATTTCAGCAAGGAGTAAAAGATTGTTTACCAACTGTATTTGGTT
ATTTAAGCATCGGTATAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDEIIKELQKLGFSQYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVHIVPSEPVKYVPVPATELMNR
MRKDFEKSFEFLDEKLNGLEQERQIDVISHIRSNDRVLKEICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFS
ILFGAPETKIGATFHHNYMTPHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
TKEFGADKLDTLWRENIDLVHVVTGKRTMEGMEDDKDE

Sequences:

>Translated_278_residues
MDEIIKELQKLGFSQYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVHIVPSEPVKYVPVPATELMNR
MRKDFEKSFEFLDEKLNGLEQERQIDVISHIRSNDRVLKEICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFS
ILFGAPETKIGATFHHNYMTPHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
TKEFGADKLDTLWRENIDLVHVVTGKRTMEGMEDDKDE
>Mature_278_residues
MDEIIKELQKLGFSQYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVHIVPSEPVKYVPVPATELMNR
MRKDFEKSFEFLDEKLNGLEQERQIDVISHIRSNDRVLKEICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFS
ILFGAPETKIGATFHHNYMTPHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
TKEFGADKLDTLWRENIDLVHVVTGKRTMEGMEDDKDE

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 32015; Mature: 32015

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIIKELQKLGFSQYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVH
CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCEE
IVPSEPVKYVPVPATELMNRMRKDFEKSFEFLDEKLNGLEQERQIDVISHIRSNDRVLKE
EECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHH
ICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFSILFGAPETKIGATFHHNYMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCC
PHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
HHHHHHHCCCEEEEEEECCCEEEEEECCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHH
TKEFGADKLDTLWRENIDLVHVVTGKRTMEGMEDDKDE
HHHHCCCHHHHHHHCCCCEEEEECCCHHHCCCCCCCCC
>Mature Secondary Structure
MDEIIKELQKLGFSQYECKAYIGLLKHSPVTGYEVSKQTGVPRSMIYEVLGKLMDKGAVH
CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCEE
IVPSEPVKYVPVPATELMNRMRKDFEKSFEFLDEKLNGLEQERQIDVISHIRSNDRVLKE
EECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHH
ICNIINRAKEELWISVWEDQVHEIEPYIHQKEEEGVHIFSILFGAPETKIGATFHHNYMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCC
PHVVEKRMGGHLTVIARDGEEVLIANFSNDSTSWAVTTYDPALVLVATEYVRHDIMVEEI
HHHHHHHCCCEEEEEEECCCEEEEEECCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHH
TKEFGADKLDTLWRENIDLVHVVTGKRTMEGMEDDKDE
HHHHCCCHHHHHHHCCCCEEEEECCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]