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The map label for this gene is 49184262

Identifier: 49184262

GI number: 49184262

Start: 1287371

End: 1287811

Strand: Direct

Name: 49184262

Synonym: BAS1245

Alternate gene names: NA

Gene position: 1287371-1287811 (Clockwise)

Preceding gene: 49184261

Following gene: 49184263

Centisome position: 24.62

GC content: 29.48

Gene sequence:

>441_bases
ATGCAAGATAGTGATTATTTTCAATATCTTAGAATAGAAGATAGAAATCAACCAGGTGTATTTCATGATGTGAAAGTTTT
GTCAGAAGATAAGAGGAAGAATGGGACGAAAGTAATTCAATTTGAAATTGGTGAATTTGAGAAGAAGCATAATATGCAAA
TGCACATACTTATTCCAGCTATTGGATACGATCATAAATATCAAGTTCAATTTGAAATTAAAGATCCAACTGTAGGTGAC
AAAGAAACAGAGAAACCAGATGATAACACTAATTCAGGCAATACGGAAACGGATAAACCAGTTGATAATCAAAATATGAT
AACAGATAACAAGTTAAGGGAACTTGTTAATAAAAAAGTATTTAATAGAAAAGATGTAAATACACCCGATTACGAAAGAA
GAGTTATTACAAGTAAAGAATTTGTTTTTAAATACGAATGA

Upstream 100 bases:

>100_bases
AAAATATATAAAGATCAAAAAGATGAGCCATCTATGGTTTCTCAATATATAAAAGATCCTAAAGTGGCGATTGTAGCTGG
GAAAAATTGTAACTGTAACG

Downstream 100 bases:

>100_bases
GATTCTTGATTATAGTGCATTAAAATATATGCCAAATTTGAAATCTTTAACAGTTGCGAATGCGAAGATAAAAGATCCGT
CGTTCTTTGCGAACTTAAAG

Product: S-layer protein, fragment

Products: NA

Alternate protein names: InteRNAlin; S-Layer Protein; Lpxtg-Motif Cell Wall Anchor Domain Protein; Cell Wall Anchor Domain-Containing Protein; S-Layer Domain Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MQDSDYFQYLRIEDRNQPGVFHDVKVLSEDKRKNGTKVIQFEIGEFEKKHNMQMHILIPAIGYDHKYQVQFEIKDPTVGD
KETEKPDDNTNSGNTETDKPVDNQNMITDNKLRELVNKKVFNRKDVNTPDYERRVITSKEFVFKYE

Sequences:

>Translated_146_residues
MQDSDYFQYLRIEDRNQPGVFHDVKVLSEDKRKNGTKVIQFEIGEFEKKHNMQMHILIPAIGYDHKYQVQFEIKDPTVGD
KETEKPDDNTNSGNTETDKPVDNQNMITDNKLRELVNKKVFNRKDVNTPDYERRVITSKEFVFKYE
>Mature_146_residues
MQDSDYFQYLRIEDRNQPGVFHDVKVLSEDKRKNGTKVIQFEIGEFEKKHNMQMHILIPAIGYDHKYQVQFEIKDPTVGD
KETEKPDDNTNSGNTETDKPVDNQNMITDNKLRELVNKKVFNRKDVNTPDYERRVITSKEFVFKYE

Specific function: Unknown

COG id: COG5386

COG function: function code M; Cell surface protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17348; Mature: 17348

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50978 NEAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSDYFQYLRIEDRNQPGVFHDVKVLSEDKRKNGTKVIQFEIGEFEKKHNMQMHILIPA
CCCCCCEEEEEEECCCCCCCEEHHHHHHCCCCCCCCEEEEEECCCCHHHCCCEEEEEEEE
IGYDHKYQVQFEIKDPTVGDKETEKPDDNTNSGNTETDKPVDNQNMITDNKLRELVNKKV
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FNRKDVNTPDYERRVITSKEFVFKYE
CCCCCCCCCCCHHEEECCCEEEEEEC
>Mature Secondary Structure
MQDSDYFQYLRIEDRNQPGVFHDVKVLSEDKRKNGTKVIQFEIGEFEKKHNMQMHILIPA
CCCCCCEEEEEEECCCCCCCEEHHHHHHCCCCCCCCEEEEEECCCCHHHCCCEEEEEEEE
IGYDHKYQVQFEIKDPTVGDKETEKPDDNTNSGNTETDKPVDNQNMITDNKLRELVNKKV
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FNRKDVNTPDYERRVITSKEFVFKYE
CCCCCCCCCCCHHEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA