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The map label for this gene is yndE [H]

Identifier: 49183701

GI number: 49183701

Start: 728804

End: 729928

Strand: Direct

Name: yndE [H]

Synonym: BAS0676

Alternate gene names: 49183701

Gene position: 728804-729928 (Clockwise)

Preceding gene: 49183700

Following gene: 49183702

Centisome position: 13.94

GC content: 33.87

Gene sequence:

>1125_bases
TTGAAACCATTTGAGTATGGCGATGAAGAAATTGGATCTCGGGAAATTGGGTTTGCGGTATCATCGACCATTATTGGTAT
AGGCGCATTATCTATGCCAAGGGATATTGCAAACCAAACTTTATTTTCAGATGGTTGGATTATTTTGCTTTTGGGTGGAT
TGATATGTGCAGTTTTAGGTTGGTTTGTAACGAGGGTGGCTATTTTATTTCCAAAACAAAACTTTGTTCAATATACGAGT
GCACATTTGACAAAGCCAGTAGCATACACGATTAGTATGGTTTTAGTATTAACGTTTGCTGCTTTGACAGCATATGAATC
ACGAATGATTGCCATAATTTCGCAAACGTATTTATTTAGTGAGACACCGGTACAGTTACTATCTTTTTTCTTCTTATTAG
TTGTTATCTATGGAATAGCAGGGTCGAGAGCAGCTTTATTACGGTTAAATGTTATGTTCTTACCTATTGTTTTAATTGCA
ATAGTGCTTCTTTCTTTATTAAATATAAATTTAATGGAAATAAACAATTTGTTTCCAGCTTTCCAAACGGAAGTAAGTCA
ATACGCTGTTGGAGTTAAAAATTCTATATTCACATTTATTGGATTTGAGGTAGCTCTGTTTTATGCTGTGTTGTTGAATG
ATAAGACAGCGAAAAAGGCACCAATGGCAGTTGCGAAAGCAGTGATAGTAAATGTCCTCTCATACATTTTAATTTATGTA
ACTTGTATTAGTGTTTTTACGTATATGACAACTCGTGGATTGACATATCCAACAATTGAATTAGGGAAAGAAATTGAAAT
TGGTGGAGGCTTTTTAGAAAGGTTCGATGCAATTTTTTTTACGACTTGGATTATTACCATTTATAACACTACAGCAATGT
ATTATGACGTCGCATCTTTATTATTTTGTGCCATGTTTCCGAAAGTGAAGAAACATATTTTTATTTTCGGAAGCGCGCCT
CTAATTTTTATGCTGAATATGCTCCCTGGTAATTTAGATACGTTATCAAGTTACGGAACGTATTTAGCGTGGATAGATAT
GGGGTTTGTCGTATTAGCTCCTTTGCTAGTTTTTATTGTATATAAAATAAAAAGAAGGAATGGTAGAAATGAAACACCTT
CTTAA

Upstream 100 bases:

>100_bases
GAAAGAAGAGTTTATTCGCATGCCAAAATCAATGTTGAAAGAGAGACCGGAATATTTACAAACGAAAGATTCTACAGTAC
GTCCAAAGGAGCGAGAATAA

Downstream 100 bases:

>100_bases
AATTATAATGGTTATAGTTTTAGCTGGATCTATAAGTGGGTGCTCTGAACTAGAAGAAATAGAAGAAAGAGGATTTGTAG
TAGGCGCAGCTTACGATATT

Product: spore germination protein GerLB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKPFEYGDEEIGSREIGFAVSSTIIGIGALSMPRDIANQTLFSDGWIILLLGGLICAVLGWFVTRVAILFPKQNFVQYTS
AHLTKPVAYTISMVLVLTFAALTAYESRMIAIISQTYLFSETPVQLLSFFFLLVVIYGIAGSRAALLRLNVMFLPIVLIA
IVLLSLLNINLMEINNLFPAFQTEVSQYAVGVKNSIFTFIGFEVALFYAVLLNDKTAKKAPMAVAKAVIVNVLSYILIYV
TCISVFTYMTTRGLTYPTIELGKEIEIGGGFLERFDAIFFTTWIITIYNTTAMYYDVASLLFCAMFPKVKKHIFIFGSAP
LIFMLNMLPGNLDTLSSYGTYLAWIDMGFVVLAPLLVFIVYKIKRRNGRNETPS

Sequences:

>Translated_374_residues
MKPFEYGDEEIGSREIGFAVSSTIIGIGALSMPRDIANQTLFSDGWIILLLGGLICAVLGWFVTRVAILFPKQNFVQYTS
AHLTKPVAYTISMVLVLTFAALTAYESRMIAIISQTYLFSETPVQLLSFFFLLVVIYGIAGSRAALLRLNVMFLPIVLIA
IVLLSLLNINLMEINNLFPAFQTEVSQYAVGVKNSIFTFIGFEVALFYAVLLNDKTAKKAPMAVAKAVIVNVLSYILIYV
TCISVFTYMTTRGLTYPTIELGKEIEIGGGFLERFDAIFFTTWIITIYNTTAMYYDVASLLFCAMFPKVKKHIFIFGSAP
LIFMLNMLPGNLDTLSSYGTYLAWIDMGFVVLAPLLVFIVYKIKRRNGRNETPS
>Mature_374_residues
MKPFEYGDEEIGSREIGFAVSSTIIGIGALSMPRDIANQTLFSDGWIILLLGGLICAVLGWFVTRVAILFPKQNFVQYTS
AHLTKPVAYTISMVLVLTFAALTAYESRMIAIISQTYLFSETPVQLLSFFFLLVVIYGIAGSRAALLRLNVMFLPIVLIA
IVLLSLLNINLMEINNLFPAFQTEVSQYAVGVKNSIFTFIGFEVALFYAVLLNDKTAKKAPMAVAKAVIVNVLSYILIYV
TCISVFTYMTTRGLTYPTIELGKEIEIGGGFLERFDAIFFTTWIITIYNTTAMYYDVASLLFCAMFPKVKKHIFIFGSAP
LIFMLNMLPGNLDTLSSYGTYLAWIDMGFVVLAPLLVFIVYKIKRRNGRNETPS

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41693; Mature: 41693

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]