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The map label for this gene is yhdP [H]

Identifier: 49183600

GI number: 49183600

Start: 621715

End: 622800

Strand: Direct

Name: yhdP [H]

Synonym: BAS0575

Alternate gene names: 49183600

Gene position: 621715-622800 (Clockwise)

Preceding gene: 49183599

Following gene: 49183601

Centisome position: 11.89

GC content: 35.08

Gene sequence:

>1086_bases
GTGGATATTTTAAAATTACTGATGGTAGCCATCCTTATTGGATTAACAGCATTTTTTGTAGCTGTTGAGTTTGCAATTAT
TAAGGTGCGTAGCAGTCGTATTGATCAACTCGTTAGTGAAAAACGACGAGGAGCATTGGCAGCGAAAAAAGTAACTTCGA
ACTTAGATGAGTATTTATCAGCATGTCAGTTAGGTATTACAATTACCGCTTTAGGGCTTGGGTGGTTAGGTGAGCCGACT
ATAAAACATTTACTTGAGCCGTTGTTTTTAAAACTAAACTTATCTCCTGCAATTGCAAGTACCGTTTCATTTATTATTGC
TTTTGCAGTTATTACGTTTTTACATGTTGTTATTGGTGAACTTGCTCCCAAAACGTTCGCCATACAAAGAGCAGAGCAAG
TTAGCTTATTATTATCGAAGCCACTTATTTACTTTTACCGAATAATGTATCCGTTTATTTGGGCTTTAAATGGTTCGGCA
AGGCTTGTAACAGGGTTATTTGGTTTACATCCAGCTTCTGAACATGAAGTAGCTCATTCAGAAGAAGAATTACGATTGAT
CTTATCTGAGAGTTATGAGAGCGGAGAGATTAATCAAAGGGAATTTAAATATGTAAATAACATTTTTGAATTTGATAATA
GAGTAGCAAAGGAAATTATGGTGCCTCGTACGGAAGTTATAGGTTTATATGAGGACGAACCATTTGAAACACATATTAAA
ATAATCGCACAAGAAAAATATACGAGGTATCCTGTATTTGGTGAAGATAAAGATGAAATCATTGGGATGGTTAATGTAAA
GGATTTATTTATTCGTTATATGGATGGTAATCGGGACGAGGAATGCTCCATTACGCCATATACAAGACCAGTTATTGAAG
TGTTAGAAAATATTCCTATACATGATTTACTATTACAAATGCAAAGAAAACATATTCCATTAGCTGTGTTGTATGATGAA
TACGGAGGTACAGCAGGAATTGTTACATTAGAAGATATTTTAGAAGAAATTGTTGGAGAAATCCGAGATGAATACGATGA
AGATGAACACCCGCCTATAGAGCATATAAGTGAAGGTGGACACTGA

Upstream 100 bases:

>100_bases
GAATTTTATATAGGGTTGCTTTCGAGTAAATGAAGAAACTAAAGTGAAACTTCTTTTTAAAAGGAGGTGTAACTTTAGCT
AAGAAAGCTAAAGGGTATAT

Downstream 100 bases:

>100_bases
AAAATTCTTCTACATGATACTCGTGTTTTTAGAGGGCGAATTTTTTAAATAGGGATTTAGAATGAAAAGTATAGGTGATG
AAAATGATAGCAACGAAGGA

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGELAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSA
RLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGGH

Sequences:

>Translated_361_residues
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGELAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSA
RLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGGH
>Mature_361_residues
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGELAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSA
RLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGGH

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=346, Percent_Identity=50.8670520231214, Blast_Score=354, Evalue=6e-98,
Organism=Escherichia coli, GI1790664, Length=339, Percent_Identity=23.8938053097345, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI145693175, Length=330, Percent_Identity=26.0606060606061, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786879, Length=170, Percent_Identity=29.4117647058824, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI87082033, Length=191, Percent_Identity=24.6073298429319, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17539402, Length=243, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 40960; Mature: 40960

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ACQLGITITALGLGWLGEPTIKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGE
HHHHCHHHEEECCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSARLVTGLFGLHPASEHEVAHS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCC
EEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHH
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPI
HHHHCCCCCCCCCCCCHHHHEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCH
HDLLLQMQRKHIPLAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGG
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCC
H
C
>Mature Secondary Structure
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ACQLGITITALGLGWLGEPTIKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGE
HHHHCHHHEEECCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWALNGSARLVTGLFGLHPASEHEVAHS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCC
EEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHH
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPI
HHHHCCCCCCCCCCCCHHHHEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCH
HDLLLQMQRKHIPLAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGG
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]