| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is cbbY [C]
Identifier: 46447638
GI number: 46447638
Start: 2385436
End: 2386221
Strand: Reverse
Name: cbbY [C]
Synonym: pc2004
Alternate gene names: 46447638
Gene position: 2386221-2385436 (Counterclockwise)
Preceding gene: 46447640
Following gene: 46447637
Centisome position: 98.83
GC content: 35.11
Gene sequence:
>786_bases ATGCATTTTAAATTGATCGATCAAATCAGACATAGCATAACGTTATTTATAGTTTTTTTCGCTTGTGGAGTTATATCTTT GTCTGCTTCTACAGATTTATACCATAAAGTAAGAGTTGTCATTTTTGATTGTGATGGAGTTTTAGTTGATACAGAATATT TGAAATTTTTAGCATGGCAAGAAGCATTAGCTAGTTACAATGTTGATTTTTCTATTGAAGAGTACATGCCACTTGTCGGA CATAGCTCAAAAAATATTCTTGCAATGATAGAACGGTCAAAACGATTAAAGCTGCCTAAACAAATTATTGATTTGAAAAA TGACAAATACAAGGCTCTTCAAAAACAAGGAGTTCAAGCAATTCAACCGATGGTGGACTTTGCTAAAGCGTTGTCCGAAA ATAAAGAAAGGTTAGCATTAAAACTAGGTCTTGCCTCTTCAGCCCCAAAAGAAGAGATTTTGATTAATCTACAACAAATT GGTTTAGATAATGCCTTTGACTTGGTAATTTCTGGTTCTGATGACCTAGAAGGCTATATTGATGAAGAAGGTAAAAATAA ACCGAAGCCCTATATTTATATTGAAGCGGCTAAAAGGTTGAATATACTTCCAGAACTTTGTTTGGTTTTTGAAGATACCG CAGCCGGTGTAGATGCTGCAGCAGGCTCTGGGATGACTGTCATTGCTGTACCCAAACAATTTACCATTAATCAAGTTTTC TCTAAGGCATCAGCAGTGCTTCCCTCTTACGAAGAATTGCCTAGCATTGAGATTTTCCAACAATAA
Upstream 100 bases:
>100_bases ATCCGAAGATCCCTTTGAATTTTAATAAAGCAGCAGGAATCGCAAAAGAGAGACCATATGCTCTTCTTAACGAGTTCAAT ATCGATCAAGAGGGAAATGT
Downstream 100 bases:
>100_bases TTTAAACATTTAATTACAGGGAAGGGAATCTATGCCCTATACAATTGTCCTAACGCCGCCTGCAGAACAGGCTCTAAAAT ATATAGAAGTATCACAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MHFKLIDQIRHSITLFIVFFACGVISLSASTDLYHKVRVVIFDCDGVLVDTEYLKFLAWQEALASYNVDFSIEEYMPLVG HSSKNILAMIERSKRLKLPKQIIDLKNDKYKALQKQGVQAIQPMVDFAKALSENKERLALKLGLASSAPKEEILINLQQI GLDNAFDLVISGSDDLEGYIDEEGKNKPKPYIYIEAAKRLNILPELCLVFEDTAAGVDAAAGSGMTVIAVPKQFTINQVF SKASAVLPSYEELPSIEIFQQ
Sequences:
>Translated_261_residues MHFKLIDQIRHSITLFIVFFACGVISLSASTDLYHKVRVVIFDCDGVLVDTEYLKFLAWQEALASYNVDFSIEEYMPLVG HSSKNILAMIERSKRLKLPKQIIDLKNDKYKALQKQGVQAIQPMVDFAKALSENKERLALKLGLASSAPKEEILINLQQI GLDNAFDLVISGSDDLEGYIDEEGKNKPKPYIYIEAAKRLNILPELCLVFEDTAAGVDAAAGSGMTVIAVPKQFTINQVF SKASAVLPSYEELPSIEIFQQ >Mature_261_residues MHFKLIDQIRHSITLFIVFFACGVISLSASTDLYHKVRVVIFDCDGVLVDTEYLKFLAWQEALASYNVDFSIEEYMPLVG HSSKNILAMIERSKRLKLPKQIIDLKNDKYKALQKQGVQAIQPMVDFAKALSENKERLALKLGLASSAPKEEILINLQQI GLDNAFDLVISGSDDLEGYIDEEGKNKPKPYIYIEAAKRLNILPELCLVFEDTAAGVDAAAGSGMTVIAVPKQFTINQVF SKASAVLPSYEELPSIEIFQQ
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789046, Length=199, Percent_Identity=28.643216080402, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787576, Length=238, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=8e-13, Organism=Drosophila melanogaster, GI45550911, Length=222, Percent_Identity=26.1261261261261, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 29105; Mature: 29105
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFKLIDQIRHSITLFIVFFACGVISLSASTDLYHKVRVVIFDCDGVLVDTEYLKFLAWQ CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEECCCEEECHHHHHHHHHH EALASYNVDFSIEEYMPLVGHSSKNILAMIERSKRLKLPKQIIDLKNDKYKALQKQGVQA HHHHHCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCHHH IQPMVDFAKALSENKERLALKLGLASSAPKEEILINLQQIGLDNAFDLVISGSDDLEGYI HHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHEEEHHHHCCCCCEEEEEECCCCCCCCC DEEGKNKPKPYIYIEAAKRLNILPELCLVFEDTAAGVDAAAGSGMTVIAVPKQFTINQVF CCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHH SKASAVLPSYEELPSIEIFQQ HHHHHCCCCHHHCCCEEECCC >Mature Secondary Structure MHFKLIDQIRHSITLFIVFFACGVISLSASTDLYHKVRVVIFDCDGVLVDTEYLKFLAWQ CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEECCCEEECHHHHHHHHHH EALASYNVDFSIEEYMPLVGHSSKNILAMIERSKRLKLPKQIIDLKNDKYKALQKQGVQA HHHHHCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCHHH IQPMVDFAKALSENKERLALKLGLASSAPKEEILINLQQIGLDNAFDLVISGSDDLEGYI HHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHEEEHHHHCCCCCEEEEEECCCCCCCCC DEEGKNKPKPYIYIEAAKRLNILPELCLVFEDTAAGVDAAAGSGMTVIAVPKQFTINQVF CCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHH SKASAVLPSYEELPSIEIFQQ HHHHHCCCCHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]