Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447637

Identifier: 46447637

GI number: 46447637

Start: 2384841

End: 2385404

Strand: Reverse

Name: 46447637

Synonym: pc2003

Alternate gene names: NA

Gene position: 2385404-2384841 (Counterclockwise)

Preceding gene: 46447638

Following gene: 46447636

Centisome position: 98.8

GC content: 39.01

Gene sequence:

>564_bases
ATGCCCTATACAATTGTCCTAACGCCGCCTGCAGAACAGGCTCTAAAATATATAGAAGTATCACAAGCTCTTTATAGCGA
CTATCAACCCAACTATTTGCTGGCAAGAGATGGAACATCTTCTCCACACATTACTGTTGTACAGTTTGAATGTGAGTCAT
CTGATCTCGCATATCAAGTTTGGACCAAAATGTGTGAAAAAATGAGCAAAGAAACCATTATTCCTTTTAGCCCTCCATTT
ATTGGAGTAGCTTTTGTTGAAGGAGCTGGTCTTTACGCAAATACTACTTGGATAGAATTGTCCGTTAAAAGAGGAGATAA
AAATTCTCCTATTATGAAAGTGCATTATGCTGCTTTAGAAGTGCTTGAGCAGTTCGGTTTGAAGCCTCTAAATGCTTGCG
ATAATGACTATAGGCCACACCTAACACTAGCCCGAATTAGTATGCCTGAGCAAATGAAAATCTGGCCTAAAAATCTATGC
GAGAATCCAGGTAATTTTAAACTAGAATTTGGCTTGTCGGATGAGAAGTGGCAGTATGCTCAAACCCTTGGATTTTTTCC
TTAA

Upstream 100 bases:

>100_bases
TTCTCTAAGGCATCAGCAGTGCTTCCCTCTTACGAAGAATTGCCTAGCATTGAGATTTTCCAACAATAATTTAAACATTT
AATTACAGGGAAGGGAATCT

Downstream 100 bases:

>100_bases
ATTCTACAAAACCTTCCCGATTGACAGAATTGGGTAGATTTTGTAGAATTAAGATATGAGAAATTCAAAATACGCTGAAC
AGTTAAAGTCTTTTCAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MPYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQVWTKMCEKMSKETIIPFSPPF
IGVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALEVLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLC
ENPGNFKLEFGLSDEKWQYAQTLGFFP

Sequences:

>Translated_187_residues
MPYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQVWTKMCEKMSKETIIPFSPPF
IGVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALEVLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLC
ENPGNFKLEFGLSDEKWQYAQTLGFFP
>Mature_186_residues
PYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQVWTKMCEKMSKETIIPFSPPFI
GVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALEVLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLCE
NPGNFKLEFGLSDEKWQYAQTLGFFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21283; Mature: 21151

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQV
CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHH
WTKMCEKMSKETIIPFSPPFIGVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALE
HHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEHHHHHH
VLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLCENPGNFKLEFGLSDEKWQYA
HHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHCCCCCCEEEEECCCCCHHHHH
QTLGFFP
HHHCCCC
>Mature Secondary Structure 
PYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQV
CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHH
WTKMCEKMSKETIIPFSPPFIGVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALE
HHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEHHHHHH
VLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLCENPGNFKLEFGLSDEKWQYA
HHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHCCCCCCEEEEECCCCCHHHHH
QTLGFFP
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA