| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447626
Identifier: 46447626
GI number: 46447626
Start: 2373951
End: 2375564
Strand: Direct
Name: 46447626
Synonym: pc1992
Alternate gene names: NA
Gene position: 2373951-2375564 (Clockwise)
Preceding gene: 46447625
Following gene: 46447627
Centisome position: 98.32
GC content: 37.24
Gene sequence:
>1614_bases ATGGAAAACCCGATTTTTAAACTTGATTTAACTTATTTGGATGGTCATTTGAATATTCCTACTTTAAATTATAGTTATCT TGTCAATACAACGCCCCCTTCTGACTATCAATCTCAAGAAATTAGCGATTCTCCTAGAGATGGAGATAACTCCTTAGTCA ATCCTTTGGCTAATCTAGAAGAAACTGGTGCATTAATAATTCAAGCTCCTGATCTTTCATCTTTATCTGAAGAACTTCAA CTAAGTTTTCAAGATGGAACTTCTCTAACTATTTCTCATTTTCAACTAGATTTGCTAAGGAAAAAATCGCCCTATTTTAA GAGTTTTTGGTCAGGAAATTTTCAAGAAACCCTTCAACATCCTCTCGCTTTGACACAAAAGGAGTTTACGTCTCTGCTTA ATTGTGTCATGGATGCTAACTTTAAAGTTCCCTTGGAAGAAATCACTTCTTCTATTCAATTAGCTGATTATTATGAGCTA ACAGAAGTGGTAAAAAGCTTAGAAGAGCAGCTAATTGATGGATACAAATCACATAGATTTGAACTCTTTAGTTCCACTAA AGAGAGTTTAGTCGGATTAAAAGAGCTTTTAAATTTTGCGCGTCAATGTCAATTAAACAATTTGAAAAACTATTTAGAAT TTACCATTGTGAGCGCCTTATTAAACCAGACTTCTCAGTTAGCGGAGTTTGAAAAAATTTTAAAGCATTTCTCAAATGAG ATAGAAGAACTCAATTTTTCAGACAATGTTTATTTGACTGATGCCTATCTTTTAGCGTTAAAAGATTGTAAAAATTTAAA AATGCTCAATCTCAAATCTTGCAAAAATCTTACTGATGCTGGGTTAGCGCACTTGACACCCCTAACAGCCCTGCGACGTT TGGATCTGAGTTTTTGCAGGAATCTTACCGATGCCGGATTAGCGAATTTGACACCCTTAATTGCTTTGCAACATTTAGAC CTAAGTTGGTGTAAAAATCTTACTGATGCAGGATTAGCCCATTTGACACCCTTAGGGGCTTTACACTATCTCGATCTAAG CATTTGCGGTAAACTCACGGATGCAGGATTAGCGCATTTAACACCCTTAGTCGATTTACAGCATTTGAATTTGCGCTATT GTCAAAAGCTCTCGGATGCTGGATTAGCGCATTTAAGATCCTTAGTGACTTTACAACATCTTGATCTAAGCTATTGCCAA AACCTTACTGATGCTGGATTGGCGCATTTGGCCCGCTTAACCGCTTTACAGCATCTCAGTCTGAATCGTTGTAAAAATCT CACAGAAGCAGGATTAGTGCATTTGAGGCCTTTAGTGACTTTACAACATCTCGATCTAAGCTATTGTCAAAAACTCACTA ACGATGGATTAGGGCTTTTTAAATCCTTAACCGCTTTACAGTATCTCAATCTGAATCATTGTCAAAAGCTCACAGATGCA GGATTAGCGCATTTGTCCCCCTTAGGGGCTTTGCAGCATTTAGATCTGTGGTGTACTAATATCACGGATGCTGGATTAGC CCATTTGAAACCCTTAGGGGCTTTACAATATTTAGGTCTAAGTAGATGCACTAATCTCACAGATGCAGGATTAGCGCATT TGTCCCCCTTATAG
Upstream 100 bases:
>100_bases AAAGGAGAAAGGGCACCAGCTAGCCAAGTTATTACAGGTAAGGGAACTGCTACAATCTTTGATGCAGAGGGTCACTTTGT TCAAAAAATTAATTATGTGA
Downstream 100 bases:
>100_bases GGGCTTTGCAGCATTTAGATCTGTGGTGTACTAATATCACGGATGCTGGATTAGCCCATTTGAAACCCTTAGTCACTTTA ACGCATTTGAGACTAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLEETGALIIQAPDLSSLSEELQ LSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQHPLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYEL TEVVKSLEEQLIDGYKSHRFELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIALQHLD LSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQ NLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL
Sequences:
>Translated_537_residues MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLEETGALIIQAPDLSSLSEELQ LSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQHPLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYEL TEVVKSLEEQLIDGYKSHRFELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIALQHLD LSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQ NLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL >Mature_537_residues MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLEETGALIIQAPDLSSLSEELQ LSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQHPLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYEL TEVVKSLEEQLIDGYKSHRFELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIALQHLD LSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQ NLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22748931, Length=317, Percent_Identity=33.4384858044164, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI27734755, Length=399, Percent_Identity=30.8270676691729, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI284447308, Length=319, Percent_Identity=33.5423197492163, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI296531375, Length=395, Percent_Identity=28.6075949367089, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI6912466, Length=267, Percent_Identity=32.9588014981273, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI161333854, Length=393, Percent_Identity=23.9185750636132, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI161333852, Length=393, Percent_Identity=23.9185750636132, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI284447314, Length=323, Percent_Identity=28.7925696594427, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI289666746, Length=313, Percent_Identity=31.3099041533546, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI16306588, Length=244, Percent_Identity=30.327868852459, Blast_Score=70, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25151694, Length=369, Percent_Identity=27.3712737127371, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI25151696, Length=369, Percent_Identity=27.3712737127371, Blast_Score=86, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6322549, Length=365, Percent_Identity=27.3972602739726, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI17647819, Length=284, Percent_Identity=35.2112676056338, Blast_Score=136, Evalue=5e-32, Organism=Drosophila melanogaster, GI21357913, Length=278, Percent_Identity=31.6546762589928, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24662818, Length=187, Percent_Identity=39.0374331550802, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI161076545, Length=297, Percent_Identity=29.2929292929293, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI24652783, Length=297, Percent_Identity=29.2929292929293, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI161076549, Length=297, Percent_Identity=29.2929292929293, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI161076547, Length=297, Percent_Identity=29.2929292929293, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24646754, Length=329, Percent_Identity=27.355623100304, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59798; Mature: 59798
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLE CCCCEEEEEEEEECCEECCCEECEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCHH ETGALIIQAPDLSSLSEELQLSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQH HCCEEEEECCCHHHHHHHHEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH PLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYELTEVVKSLEEQLIDGYKSHRF HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCR HHHCCCCCCEEEHHHHHHHHHHCCCCCEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC NLTDAGLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHL CCHHCCHHHHHHHHHHHHCCHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH TPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHLS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHH LNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHC GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL CHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLE CCCCEEEEEEEEECCEECCCEECEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCHH ETGALIIQAPDLSSLSEELQLSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQH HCCEEEEECCCHHHHHHHHEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH PLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYELTEVVKSLEEQLIDGYKSHRF HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCR HHHCCCCCCEEEHHHHHHHHHHCCCCCEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC NLTDAGLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHL CCHHCCHHHHHHHHHHHHCCHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH TPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHLS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHH LNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHC GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL CHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA