Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447625

Identifier: 46447625

GI number: 46447625

Start: 2372696

End: 2373970

Strand: Direct

Name: 46447625

Synonym: pc1991

Alternate gene names: NA

Gene position: 2372696-2373970 (Clockwise)

Preceding gene: 46447624

Following gene: 46447626

Centisome position: 98.27

GC content: 35.69

Gene sequence:

>1275_bases
ATGACCCTATGGGTTTTTCTAGCATTTTTAGCCTTAACTTTTTCTAGTGCTAAGCGAAACACCTATCGCAAACGCCCTCT
ACCTTTAACTAGCATTCATATCATTGATAGAAATGGATTTGCGGAAACAATTAGCAATAAAGATCGGCTGAATCAATATC
AACAAACAGATTTTTTATCCTCTCAACCTTATCAAAAAGTGCTTCGAATTTATGCAAGAGATTCAAAAGGAAATGTACGA
TCTGTTGTTACGACCTATCACGCTAATGGAAACCCCAAGCAATTTTTACAAATTTTAAATGGAAGAGCTAATGGGTGTTA
CTATGAATGGCACGAAAACGGATCTATAAGTCTTTCCACAAAAGTCATCGGAGGAGTTGCAGATGTCACACCTTCAGCAG
AAAGATCATGGATTTTTGATGGTTCAAGCTATGCATGGGATGAAGATGAAAACCTTATAGGTGAGATTTTTTACAATCAA
GGGTCTTTAGAAGGAATTTCAACTCATTACCATAGTTGTGGGCAAGTATGGAAGCAAATACCTTATAAAAAAAATCAAAT
TGAAGGTGTTTGTGAAATTTATAAAACAAATGGCGAAATCCTCCAACAAATCAATTACGTTCAAGGACAAAAACATGGAC
CATCGTTTCGCTACTGGGACAACAAAAATTTAGCCAGCCAAGAAGAATATTGCAAAGGTAAGCTAGAAAATGGTCAATAT
TTTGATCAGCAAGGAAATTCTGTAGCAGAAGTCAAGCAAGGAACAGGTTTTAGAGCTGTATTTGGGAAAGATTATATTAA
AGAAATTCAAGAATATCGAGAGGGAATTCTTGAAGGAGAGGTAAAAGTTTTTACGGCTTGTGGTAACCTTAAGCGTGTTT
ATCACGTTAAAAATCAAATTAAACATGGAGAAGAAGTGGATTATTATGACAGTATCAACCCACAAACAATCCAACCCAAA
CTAGCGTTTTATTGGTATGAAGGAAAAATTCAAGGACATGTGAGAACTTGGTATTCAAATGGCGTCCAAGAAAGTCAAAA
AGAAATGGCTAACAATGCTAAACATGGGGTTTCTACAGCTTGGTATCAAGACGGCAATTTAATGATGATTGAAGAGTATG
ATAACGATAAATTAATCAAAGGGGATTACTTTAGAAAAGGAGAAAGGGCACCAGCTAGCCAAGTTATTACAGGTAAGGGA
ACTGCTACAATCTTTGATGCAGAGGGTCACTTTGTTCAAAAAATTAATTATGTGAATGGAAAACCCGATTTTTAA

Upstream 100 bases:

>100_bases
TAGATAAAAAGAAAGTTTATGAAAAAAATGAAGTTTTTGTTCTTAATCTTAAACTTCTGAAAAGAGAATTTTTATGATCA
AAACGAAAGCATTTAAACAA

Downstream 100 bases:

>100_bases
ACTTGATTTAACTTATTTGGATGGTCATTTGAATATTCCTACTTTAAATTATAGTTATCTTGTCAATACAACGCCCCCTT
CTGACTATCAATCTCAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MTLWVFLAFLALTFSSAKRNTYRKRPLPLTSIHIIDRNGFAETISNKDRLNQYQQTDFLSSQPYQKVLRIYARDSKGNVR
SVVTTYHANGNPKQFLQILNGRANGCYYEWHENGSISLSTKVIGGVADVTPSAERSWIFDGSSYAWDEDENLIGEIFYNQ
GSLEGISTHYHSCGQVWKQIPYKKNQIEGVCEIYKTNGEILQQINYVQGQKHGPSFRYWDNKNLASQEEYCKGKLENGQY
FDQQGNSVAEVKQGTGFRAVFGKDYIKEIQEYREGILEGEVKVFTACGNLKRVYHVKNQIKHGEEVDYYDSINPQTIQPK
LAFYWYEGKIQGHVRTWYSNGVQESQKEMANNAKHGVSTAWYQDGNLMMIEEYDNDKLIKGDYFRKGERAPASQVITGKG
TATIFDAEGHFVQKINYVNGKPDF

Sequences:

>Translated_424_residues
MTLWVFLAFLALTFSSAKRNTYRKRPLPLTSIHIIDRNGFAETISNKDRLNQYQQTDFLSSQPYQKVLRIYARDSKGNVR
SVVTTYHANGNPKQFLQILNGRANGCYYEWHENGSISLSTKVIGGVADVTPSAERSWIFDGSSYAWDEDENLIGEIFYNQ
GSLEGISTHYHSCGQVWKQIPYKKNQIEGVCEIYKTNGEILQQINYVQGQKHGPSFRYWDNKNLASQEEYCKGKLENGQY
FDQQGNSVAEVKQGTGFRAVFGKDYIKEIQEYREGILEGEVKVFTACGNLKRVYHVKNQIKHGEEVDYYDSINPQTIQPK
LAFYWYEGKIQGHVRTWYSNGVQESQKEMANNAKHGVSTAWYQDGNLMMIEEYDNDKLIKGDYFRKGERAPASQVITGKG
TATIFDAEGHFVQKINYVNGKPDF
>Mature_423_residues
TLWVFLAFLALTFSSAKRNTYRKRPLPLTSIHIIDRNGFAETISNKDRLNQYQQTDFLSSQPYQKVLRIYARDSKGNVRS
VVTTYHANGNPKQFLQILNGRANGCYYEWHENGSISLSTKVIGGVADVTPSAERSWIFDGSSYAWDEDENLIGEIFYNQG
SLEGISTHYHSCGQVWKQIPYKKNQIEGVCEIYKTNGEILQQINYVQGQKHGPSFRYWDNKNLASQEEYCKGKLENGQYF
DQQGNSVAEVKQGTGFRAVFGKDYIKEIQEYREGILEGEVKVFTACGNLKRVYHVKNQIKHGEEVDYYDSINPQTIQPKL
AFYWYEGKIQGHVRTWYSNGVQESQKEMANNAKHGVSTAWYQDGNLMMIEEYDNDKLIKGDYFRKGERAPASQVITGKGT
ATIFDAEGHFVQKINYVNGKPDF

Specific function: Unknown

COG id: COG2849

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48638; Mature: 48507

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLWVFLAFLALTFSSAKRNTYRKRPLPLTSIHIIDRNGFAETISNKDRLNQYQQTDFLS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHCCHHHHHHHHHHHCCC
SQPYQKVLRIYARDSKGNVRSVVTTYHANGNPKQFLQILNGRANGCYYEWHENGSISLST
CCHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEH
KVIGGVADVTPSAERSWIFDGSSYAWDEDENLIGEIFYNQGSLEGISTHYHSCGQVWKQI
HEECCHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
PYKKNQIEGVCEIYKTNGEILQQINYVQGQKHGPSFRYWDNKNLASQEEYCKGKLENGQY
CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCE
FDQQGNSVAEVKQGTGFRAVFGKDYIKEIQEYREGILEGEVKVFTACGNLKRVYHVKNQI
ECCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
KHGEEVDYYDSINPQTIQPKLAFYWYEGKIQGHVRTWYSNGVQESQKEMANNAKHGVSTA
CCCCCCCCCCCCCCCEECCEEEEEEEEEEEECEEEEEHHCCHHHHHHHHHHCCCCCCCEE
WYQDGNLMMIEEYDNDKLIKGDYFRKGERAPASQVITGKGTATIFDAEGHFVQKINYVNG
EEECCCEEEEEECCCCCEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCEEEEEEECCC
KPDF
CCCC
>Mature Secondary Structure 
TLWVFLAFLALTFSSAKRNTYRKRPLPLTSIHIIDRNGFAETISNKDRLNQYQQTDFLS
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHCCHHHHHHHHHHHCCC
SQPYQKVLRIYARDSKGNVRSVVTTYHANGNPKQFLQILNGRANGCYYEWHENGSISLST
CCHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEH
KVIGGVADVTPSAERSWIFDGSSYAWDEDENLIGEIFYNQGSLEGISTHYHSCGQVWKQI
HEECCHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
PYKKNQIEGVCEIYKTNGEILQQINYVQGQKHGPSFRYWDNKNLASQEEYCKGKLENGQY
CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCE
FDQQGNSVAEVKQGTGFRAVFGKDYIKEIQEYREGILEGEVKVFTACGNLKRVYHVKNQI
ECCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
KHGEEVDYYDSINPQTIQPKLAFYWYEGKIQGHVRTWYSNGVQESQKEMANNAKHGVSTA
CCCCCCCCCCCCCCCEECCEEEEEEEEEEEECEEEEEHHCCHHHHHHHHHHCCCCCCCEE
WYQDGNLMMIEEYDNDKLIKGDYFRKGERAPASQVITGKGTATIFDAEGHFVQKINYVNG
EEECCCEEEEEECCCCCEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCEEEEEEECCC
KPDF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA