| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447566
Identifier: 46447566
GI number: 46447566
Start: 2299360
End: 2299608
Strand: Reverse
Name: 46447566
Synonym: pc1932
Alternate gene names: NA
Gene position: 2299608-2299360 (Counterclockwise)
Preceding gene: 46447568
Following gene: 46447565
Centisome position: 95.24
GC content: 36.55
Gene sequence:
>249_bases TTGCTACAAAAAAATTATAGGTTAGATTCTATTGTTTATAAGGCTACTTATAAACAAGTCAAGGTGACAATGATCAAACG AAAGCCAAAAAATCAGAAAGCACATGAAGAGCCGATTGAAATCAAGAAAACAACTCATGAAAAAAGCGAGCTTGCCACAG CGAAGCTCCCTTTCAATTTTCCATTTCAAAATCTGAGATGCCTGACAGAACACAGAGAAATTTTTGAAGGGCTGTTGGGA GGGAAGTAA
Upstream 100 bases:
>100_bases AGGTTAATAGATTTTTAGCTATATATGTAGGAAAGTGTATTTTATGCTAAATAGCTAAGAAGTTTTAATGTCACAACTCA TCAATTGGTAAAACATTATA
Downstream 100 bases:
>100_bases TTTATGAGCTTGATGCCAACAATCATTGATCCGCTTCTCTCATCTACTTTGGAAACCTATGAACAGGCAAAAGCATTTCA AACAAATTTGGTTTGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MLQKNYRLDSIVYKATYKQVKVTMIKRKPKNQKAHEEPIEIKKTTHEKSELATAKLPFNFPFQNLRCLTEHREIFEGLLG GK
Sequences:
>Translated_82_residues MLQKNYRLDSIVYKATYKQVKVTMIKRKPKNQKAHEEPIEIKKTTHEKSELATAKLPFNFPFQNLRCLTEHREIFEGLLG GK >Mature_82_residues MLQKNYRLDSIVYKATYKQVKVTMIKRKPKNQKAHEEPIEIKKTTHEKSELATAKLPFNFPFQNLRCLTEHREIFEGLLG GK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9674; Mature: 9674
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQKNYRLDSIVYKATYKQVKVTMIKRKPKNQKAHEEPIEIKKTTHEKSELATAKLPFNF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHCEEECCCCCC PFQNLRCLTEHREIFEGLLGGK CHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLQKNYRLDSIVYKATYKQVKVTMIKRKPKNQKAHEEPIEIKKTTHEKSELATAKLPFNF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHCEEECCCCCC PFQNLRCLTEHREIFEGLLGGK CHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA