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The map label for this gene is 46447565

Identifier: 46447565

GI number: 46447565

Start: 2298766

End: 2299356

Strand: Reverse

Name: 46447565

Synonym: pc1931

Alternate gene names: NA

Gene position: 2299356-2298766 (Counterclockwise)

Preceding gene: 46447566

Following gene: 46447564

Centisome position: 95.23

GC content: 40.61

Gene sequence:

>591_bases
ATGAGCTTGATGCCAACAATCATTGATCCGCTTCTCTCATCTACTTTGGAAACCTATGAACAGGCAAAAGCATTTCAAAC
AAATTTGGTTTGGAAAAAACTGGATGAAATCACGGTAGAAGAAGCAATTTCCTACAGGCTTCCAACTTTAACCCTGAAAA
CGCAGATTAATTATCGTTCAGGCATTCGAAAGCTGGTTGAATTTGGTTTGCTCAACCCTCTCATCAGTCTGCAAGCTTTT
GCTTTGACTAACCATGAGGCTATTATTGATAGAATTAAACTCATACAAGAATGGGCTGAATCCAGCCGACAGGCACGGGC
AGCTTGCTATATCTCCTTTGCAGGGTTTTTAAATCGACGTTTGCAAGGTGTTGTAAAAAAGGCTCTCCCAAATAAGGAAG
GGAGTTCGAAAACATTTTTTAGAATAAACGAGAAGGTGAAAACATTGGCAATGTTTCAAGCGCAATGGATCGCATTCTTC
AAAGAATTGGAGAAAATTAATCCCAGGGATTGCTTGATCGGAAAGGTGATTTTGCAGGGAGGCAAACGGGTAAACGAAGT
TTTGTCCCTGCAAACCCATCAAATCGATTGA

Upstream 100 bases:

>100_bases
TGCCACAGCGAAGCTCCCTTTCAATTTTCCATTTCAAAATCTGAGATGCCTGACAGAACACAGAGAAATTTTTGAAGGGC
TGTTGGGAGGGAAGTAATTT

Downstream 100 bases:

>100_bases
GAGAACTGCGAAATCACCTTTCCTCAGTCAAAAATGAAGGGAGTTTACAAGGAGACTGTGATTACCTATTCAAATAGCAT
TATGGAAAGGCTTCTAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSLMPTIIDPLLSSTLETYEQAKAFQTNLVWKKLDEITVEEAISYRLPTLTLKTQINYRSGIRKLVEFGLLNPLISLQAF
ALTNHEAIIDRIKLIQEWAESSRQARAACYISFAGFLNRRLQGVVKKALPNKEGSSKTFFRINEKVKTLAMFQAQWIAFF
KELEKINPRDCLIGKVILQGGKRVNEVLSLQTHQID

Sequences:

>Translated_196_residues
MSLMPTIIDPLLSSTLETYEQAKAFQTNLVWKKLDEITVEEAISYRLPTLTLKTQINYRSGIRKLVEFGLLNPLISLQAF
ALTNHEAIIDRIKLIQEWAESSRQARAACYISFAGFLNRRLQGVVKKALPNKEGSSKTFFRINEKVKTLAMFQAQWIAFF
KELEKINPRDCLIGKVILQGGKRVNEVLSLQTHQID
>Mature_195_residues
SLMPTIIDPLLSSTLETYEQAKAFQTNLVWKKLDEITVEEAISYRLPTLTLKTQINYRSGIRKLVEFGLLNPLISLQAFA
LTNHEAIIDRIKLIQEWAESSRQARAACYISFAGFLNRRLQGVVKKALPNKEGSSKTFFRINEKVKTLAMFQAQWIAFFK
ELEKINPRDCLIGKVILQGGKRVNEVLSLQTHQID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 22414; Mature: 22282

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMPTIIDPLLSSTLETYEQAKAFQTNLVWKKLDEITVEEAISYRLPTLTLKTQINYRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
GIRKLVEFGLLNPLISLQAFALTNHEAIIDRIKLIQEWAESSRQARAACYISFAGFLNRR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQGVVKKALPNKEGSSKTFFRINEKVKTLAMFQAQWIAFFKELEKINPRDCLIGKVILQG
HHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
GKRVNEVLSLQTHQID
CHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLMPTIIDPLLSSTLETYEQAKAFQTNLVWKKLDEITVEEAISYRLPTLTLKTQINYRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
GIRKLVEFGLLNPLISLQAFALTNHEAIIDRIKLIQEWAESSRQARAACYISFAGFLNRR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQGVVKKALPNKEGSSKTFFRINEKVKTLAMFQAQWIAFFKELEKINPRDCLIGKVILQG
HHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
GKRVNEVLSLQTHQID
CHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202459 [H]