| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447556
Identifier: 46447556
GI number: 46447556
Start: 2287548
End: 2287862
Strand: Direct
Name: 46447556
Synonym: pc1922
Alternate gene names: NA
Gene position: 2287548-2287862 (Clockwise)
Preceding gene: 46447550
Following gene: 46447557
Centisome position: 94.74
GC content: 34.92
Gene sequence:
>315_bases ATGCCAAGACCCGTTAAAATTCCCGTTGGTCAACAAACTAAAATTACTTTGACATGTTCAATTGAACAGCGAAAAGCTAT TAGAATGTTGGCTGCGCAAGAAGATAAAAGCATGAATGAGTATCTTTTATCATTAGTAGAAGAAAAAAAAATGAGCTGCC CTCTTTGTGAAAACTATGGACCAAATGCTTTAACTATCAAAACAATGGAAGAAGCTGATCGCGGAGAAAATTTAGAAGAA TATGAAAGCCTTGATGAGTTCTGGAAATCTATAGGAAAAGGCAATGCTAAAACCGAAAAACACAAAGCAGTTTAA
Upstream 100 bases:
>100_bases TAAAGTTCATTGTTAAGGTAAAGATGTTTTTACTTATTTTGAGTTATTTACGTAAATCACTTTTTTTGTTACTCTAAATA TAGATAAACAGGAGGTAATT
Downstream 100 bases:
>100_bases AAAAGATTTAAAAAAATATGAACACAATAAACTTATTTTAAAAGAACTGTATCTTGTCATTGCTTATCTTTTAAATGAAC AAGTTTTGCCTAATCAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MPRPVKIPVGQQTKITLTCSIEQRKAIRMLAAQEDKSMNEYLLSLVEEKKMSCPLCENYGPNALTIKTMEEADRGENLEE YESLDEFWKSIGKGNAKTEKHKAV
Sequences:
>Translated_104_residues MPRPVKIPVGQQTKITLTCSIEQRKAIRMLAAQEDKSMNEYLLSLVEEKKMSCPLCENYGPNALTIKTMEEADRGENLEE YESLDEFWKSIGKGNAKTEKHKAV >Mature_103_residues PRPVKIPVGQQTKITLTCSIEQRKAIRMLAAQEDKSMNEYLLSLVEEKKMSCPLCENYGPNALTIKTMEEADRGENLEEY ESLDEFWKSIGKGNAKTEKHKAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11834; Mature: 11703
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPVKIPVGQQTKITLTCSIEQRKAIRMLAAQEDKSMNEYLLSLVEEKKMSCPLCENYG CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC PNALTIKTMEEADRGENLEEYESLDEFWKSIGKGNAKTEKHKAV CCEEEEEECHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PRPVKIPVGQQTKITLTCSIEQRKAIRMLAAQEDKSMNEYLLSLVEEKKMSCPLCENYG CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC PNALTIKTMEEADRGENLEEYESLDEFWKSIGKGNAKTEKHKAV CCEEEEEECHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA