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The map label for this gene is yafQ [C]

Identifier: 46447557

GI number: 46447557

Start: 2287831

End: 2288109

Strand: Direct

Name: yafQ [C]

Synonym: pc1923

Alternate gene names: 46447557

Gene position: 2287831-2288109 (Clockwise)

Preceding gene: 46447556

Following gene: 46447558

Centisome position: 94.76

GC content: 32.97

Gene sequence:

>279_bases
ATGCTAAAACCGAAAAACACAAAGCAGTTTAAAAAAGATTTAAAAAAATATGAACACAATAAACTTATTTTAAAAGAACT
GTATCTTGTCATTGCTTATCTTTTAAATGAACAAGTTTTGCCTAATCAATACCGCGATCATGCTCTACTAGGCAATTGGC
AAGGCCGTAGAGAATGCCATATTAAAAACGACACATTGTTAATTTATAAGCTGTTGCCTGAGGAGCGAGCCATACGATTT
GAAAGGATTGGTTCGCATTCTGAAGTTCTAAATATGTAA

Upstream 100 bases:

>100_bases
AATGCTTTAACTATCAAAACAATGGAAGAAGCTGATCGCGGAGAAAATTTAGAAGAATATGAAAGCCTTGATGAGTTCTG
GAAATCTATAGGAAAAGGCA

Downstream 100 bases:

>100_bases
TAACGACAAGAAGTTTTGATCTATTCGATAATGGTTTTATGATGGAGCCTAGCATTTTTATCTTACTCTCAATGACTAAT
ATAATTTAACAAACAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLKPKNTKQFKKDLKKYEHNKLILKELYLVIAYLLNEQVLPNQYRDHALLGNWQGRRECHIKNDTLLIYKLLPEERAIRF
ERIGSHSEVLNM

Sequences:

>Translated_92_residues
MLKPKNTKQFKKDLKKYEHNKLILKELYLVIAYLLNEQVLPNQYRDHALLGNWQGRRECHIKNDTLLIYKLLPEERAIRF
ERIGSHSEVLNM
>Mature_92_residues
MLKPKNTKQFKKDLKKYEHNKLILKELYLVIAYLLNEQVLPNQYRDHALLGNWQGRRECHIKNDTLLIYKLLPEERAIRF
ERIGSHSEVLNM

Specific function: Unknown

COG id: COG3041

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafQ [H]

Homologues:

Organism=Escherichia coli, GI1786419, Length=86, Percent_Identity=34.8837209302326, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004386
- InterPro:   IPR007712
- InterPro:   IPR012753 [H]

Pfam domain/function: PF05016 Plasmid_stabil [H]

EC number: NA

Molecular weight: Translated: 11104; Mature: 11104

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPKNTKQFKKDLKKYEHNKLILKELYLVIAYLLNEQVLPNQYRDHALLGNWQGRRECH
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
IKNDTLLIYKLLPEERAIRFERIGSHSEVLNM
ECCCEEEEEEECCHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure
MLKPKNTKQFKKDLKKYEHNKLILKELYLVIAYLLNEQVLPNQYRDHALLGNWQGRRECH
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
IKNDTLLIYKLLPEERAIRFERIGSHSEVLNM
ECCCEEEEEEECCHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]