Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447534

Identifier: 46447534

GI number: 46447534

Start: 2264109

End: 2264633

Strand: Direct

Name: 46447534

Synonym: pc1900

Alternate gene names: NA

Gene position: 2264109-2264633 (Clockwise)

Preceding gene: 46447518

Following gene: 46447539

Centisome position: 93.77

GC content: 34.86

Gene sequence:

>525_bases
ATGAACAGTAACGATTCAAACCAATCTAATAATGAACCTAACAAGCCTTTTACGCCTTACGACGCTTCTCAATTAAGTCA
AAATTCAAATCCTGACATGACACAAAAAGACAAAAATTTTTCTCAAAAAGAAAGAGCTGAAGATAAAATTAGAGAACAAT
TACGTTTTGCTAGAGAATCGAAAAATAATGATGAAATTTTCGATTTTGCAAAAAACAACAAAGAACAAATGATCACTTAT
CTTCTTTTAGGGCTAGGGATTGTTCTCATGATGTTTATGTACGGTAGCCTATTAGGAGAGCTAATCATTGGAATGGTTGT
AGGCTATCACTTTGCATCCGAGATTGTCTTTTATCTCCAAAACGTCAGGCATTTTTTTTCGAATAAAGAGCAACTTCGCT
CTATCGTATTAACAGTTGTTCTAGTGGCTTTATTTATTGCAGCACCAGGAATTTTTATCGGCGCAGCCATTATTGCAGCT
ATACAACAATTCATGCCTAATAAGGGCGGCAATCGTGATGAATAA

Upstream 100 bases:

>100_bases
TGTAAGCTAGGAAATTTGAAACTTATCAATAAATCCAACGAAAAAAGATAGTGTAAAATCAAATGTTTATTCTAACAAAA
GATTTAAATAAGGAAAAATA

Downstream 100 bases:

>100_bases
CAAATTGTAATATACAAATGGCGTTGATTCGATGCAGAATTAATCCGCATCGAATCAACGCCATTTATTCTTATAGTCTC
TTAAGATTGATGAAATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARESKNNDEIFDFAKNNKEQMITY
LLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQNVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAA
IQQFMPNKGGNRDE

Sequences:

>Translated_174_residues
MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARESKNNDEIFDFAKNNKEQMITY
LLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQNVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAA
IQQFMPNKGGNRDE
>Mature_174_residues
MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARESKNNDEIFDFAKNNKEQMITY
LLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQNVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAA
IQQFMPNKGGNRDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19766; Mature: 19766

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARES
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHC
KNNDEIFDFAKNNKEQMITYLLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQ
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAAIQQFMPNKGGNRDE
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARES
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHC
KNNDEIFDFAKNNKEQMITYLLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQ
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAAIQQFMPNKGGNRDE
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA