| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447534
Identifier: 46447534
GI number: 46447534
Start: 2264109
End: 2264633
Strand: Direct
Name: 46447534
Synonym: pc1900
Alternate gene names: NA
Gene position: 2264109-2264633 (Clockwise)
Preceding gene: 46447518
Following gene: 46447539
Centisome position: 93.77
GC content: 34.86
Gene sequence:
>525_bases ATGAACAGTAACGATTCAAACCAATCTAATAATGAACCTAACAAGCCTTTTACGCCTTACGACGCTTCTCAATTAAGTCA AAATTCAAATCCTGACATGACACAAAAAGACAAAAATTTTTCTCAAAAAGAAAGAGCTGAAGATAAAATTAGAGAACAAT TACGTTTTGCTAGAGAATCGAAAAATAATGATGAAATTTTCGATTTTGCAAAAAACAACAAAGAACAAATGATCACTTAT CTTCTTTTAGGGCTAGGGATTGTTCTCATGATGTTTATGTACGGTAGCCTATTAGGAGAGCTAATCATTGGAATGGTTGT AGGCTATCACTTTGCATCCGAGATTGTCTTTTATCTCCAAAACGTCAGGCATTTTTTTTCGAATAAAGAGCAACTTCGCT CTATCGTATTAACAGTTGTTCTAGTGGCTTTATTTATTGCAGCACCAGGAATTTTTATCGGCGCAGCCATTATTGCAGCT ATACAACAATTCATGCCTAATAAGGGCGGCAATCGTGATGAATAA
Upstream 100 bases:
>100_bases TGTAAGCTAGGAAATTTGAAACTTATCAATAAATCCAACGAAAAAAGATAGTGTAAAATCAAATGTTTATTCTAACAAAA GATTTAAATAAGGAAAAATA
Downstream 100 bases:
>100_bases CAAATTGTAATATACAAATGGCGTTGATTCGATGCAGAATTAATCCGCATCGAATCAACGCCATTTATTCTTATAGTCTC TTAAGATTGATGAAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARESKNNDEIFDFAKNNKEQMITY LLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQNVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAA IQQFMPNKGGNRDE
Sequences:
>Translated_174_residues MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARESKNNDEIFDFAKNNKEQMITY LLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQNVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAA IQQFMPNKGGNRDE >Mature_174_residues MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARESKNNDEIFDFAKNNKEQMITY LLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQNVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAA IQQFMPNKGGNRDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19766; Mature: 19766
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARES CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHC KNNDEIFDFAKNNKEQMITYLLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQ CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAAIQQFMPNKGGNRDE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKIREQLRFARES CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHC KNNDEIFDFAKNNKEQMITYLLLGLGIVLMMFMYGSLLGELIIGMVVGYHFASEIVFYLQ CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVRHFFSNKEQLRSIVLTVVLVALFIAAPGIFIGAAIIAAIQQFMPNKGGNRDE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA