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The map label for this gene is yfiH [C]

Identifier: 46447502

GI number: 46447502

Start: 2227444

End: 2228214

Strand: Direct

Name: yfiH [C]

Synonym: pc1868

Alternate gene names: 46447502

Gene position: 2227444-2228214 (Clockwise)

Preceding gene: 46447500

Following gene: 46447503

Centisome position: 92.25

GC content: 35.67

Gene sequence:

>771_bases
ATGATGCGACATTTCAAAGAAGATCGGCTCGAGTGGCTAGAATTTGAGCTTTTAACAGATATTCCTCACTTAAAACATGC
TGTTTTTCTACGTAAAGGGGGATATAGTGTTGATCCTTTTAATCAATTGAATGTGAGCTATTCTGTAGGAGACAATCCAA
TCTCAGTTGAAAAAAATCGTAGCTTGATTGAAAACAGTCTAAAAAATGGCACTCCTCATACATTTAAAATGATTCATGGG
CATGCTTGTCATGGCCATCAAGTCGCTCCAGTGGAGATCGATTCTCCTTCAACTATTCTGTTGACAGATGGTTTAACTTG
CGCAACACCAGGCATTGCTTTAATGATGACCCATGCAGATTGTCAAATTGCTTTATTTTATGATCCTCAACATCACGTGA
TTGCGAATGTTCATGCTGGATGGAGAGGTAGTGTACAAAATATTTATGCAAAAACTATTACGCAGATGAAAGATCGATTT
GGATCTGACCCTAAAAATCTACTTGTTTGCATTTCCCCCAGTCTTGGACCTGAGGAATCAGAATTTATTCATTATAAAAA
TGAATTCCCTGAAGAATTTTGGGAATTTCAATTTAAACCAAATTATTTTGATTTTTGGTCATTAACGGAGTATCAATTGC
AAAAAGAGGGAATTCTTTTTCATCACATCGAAGTGGCAAGATTAAGTACATTTACAAATCCAAACGATTATTTTTCCTAT
CGGAGAGAAAAAATAACGGGAAGGAATGCCACAATTATTATGCTTTTGTAA

Upstream 100 bases:

>100_bases
ACAGAAGTCAATAGCATTTGTCTGTTACCCCGCAAAGTTTTGCCTTTTTCTTCATAATTTTTTTACTCTTCAATAATAAT
AATAATCCTACTACGGTTAA

Downstream 100 bases:

>100_bases
AAAGTAACCCTATTTAAAGTACTAAAAAGGCACATTAATGGTAGATAAAAATTTATTTTGCGATATTTATTTAATCCGGC
ATGGAGAGACAGATTGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MMRHFKEDRLEWLEFELLTDIPHLKHAVFLRKGGYSVDPFNQLNVSYSVGDNPISVEKNRSLIENSLKNGTPHTFKMIHG
HACHGHQVAPVEIDSPSTILLTDGLTCATPGIALMMTHADCQIALFYDPQHHVIANVHAGWRGSVQNIYAKTITQMKDRF
GSDPKNLLVCISPSLGPEESEFIHYKNEFPEEFWEFQFKPNYFDFWSLTEYQLQKEGILFHHIEVARLSTFTNPNDYFSY
RREKITGRNATIIMLL

Sequences:

>Translated_256_residues
MMRHFKEDRLEWLEFELLTDIPHLKHAVFLRKGGYSVDPFNQLNVSYSVGDNPISVEKNRSLIENSLKNGTPHTFKMIHG
HACHGHQVAPVEIDSPSTILLTDGLTCATPGIALMMTHADCQIALFYDPQHHVIANVHAGWRGSVQNIYAKTITQMKDRF
GSDPKNLLVCISPSLGPEESEFIHYKNEFPEEFWEFQFKPNYFDFWSLTEYQLQKEGILFHHIEVARLSTFTNPNDYFSY
RREKITGRNATIIMLL
>Mature_256_residues
MMRHFKEDRLEWLEFELLTDIPHLKHAVFLRKGGYSVDPFNQLNVSYSVGDNPISVEKNRSLIENSLKNGTPHTFKMIHG
HACHGHQVAPVEIDSPSTILLTDGLTCATPGIALMMTHADCQIALFYDPQHHVIANVHAGWRGSVQNIYAKTITQMKDRF
GSDPKNLLVCISPSLGPEESEFIHYKNEFPEEFWEFQFKPNYFDFWSLTEYQLQKEGILFHHIEVARLSTFTNPNDYFSY
RREKITGRNATIIMLL

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=236, Percent_Identity=29.2372881355932, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 29556; Mature: 29556

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRHFKEDRLEWLEFELLTDIPHLKHAVFLRKGGYSVDPFNQLNVSYSVGDNPISVEKNR
CCCCCHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCHHHEEEEEEECCCCEEECCCH
SLIENSLKNGTPHTFKMIHGHACHGHQVAPVEIDSPSTILLTDGLTCATPGIALMMTHAD
HHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCEECCCCEEEEEEECC
CQIALFYDPQHHVIANVHAGWRGSVQNIYAKTITQMKDRFGSDPKNLLVCISPSLGPEES
EEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
EFIHYKNEFPEEFWEFQFKPNYFDFWSLTEYQLQKEGILFHHIEVARLSTFTNPNDYFSY
CEEEECCCCCHHHHCEEECCCEEECCCCHHHHHHHCCEEEEEEEEEEEEECCCCHHHHHH
RREKITGRNATIIMLL
HHHHCCCCCEEEEEEC
>Mature Secondary Structure
MMRHFKEDRLEWLEFELLTDIPHLKHAVFLRKGGYSVDPFNQLNVSYSVGDNPISVEKNR
CCCCCHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCHHHEEEEEEECCCCEEECCCH
SLIENSLKNGTPHTFKMIHGHACHGHQVAPVEIDSPSTILLTDGLTCATPGIALMMTHAD
HHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCEECCCCEEEEEEECC
CQIALFYDPQHHVIANVHAGWRGSVQNIYAKTITQMKDRFGSDPKNLLVCISPSLGPEES
EEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
EFIHYKNEFPEEFWEFQFKPNYFDFWSLTEYQLQKEGILFHHIEVARLSTFTNPNDYFSY
CEEEECCCCCHHHHCEEECCCEEECCCCHHHHHHHCCEEEEEEEEEEEEECCCCHHHHHH
RREKITGRNATIIMLL
HHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 8097014 [H]