Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447500

Identifier: 46447500

GI number: 46447500

Start: 2225721

End: 2226617

Strand: Direct

Name: 46447500

Synonym: pc1866

Alternate gene names: NA

Gene position: 2225721-2226617 (Clockwise)

Preceding gene: 46447499

Following gene: 46447502

Centisome position: 92.18

GC content: 33.44

Gene sequence:

>897_bases
ATGAATAGAATTCGCAACTCAAGTTATAAACAAGTAAATATTCCAAAAGATCTTCAACTAATCCAGGAATGGTTTGCAAA
TGTTATTACTACACCTTTAGCAAAAAATGATACGATTCATCATAAAACTAAAAACGGAGATTTAATCTCCGAGGAAGCAA
AAAACTATATTGCTCCAAGCCCTACGCTTCTTCCTCATCAATGCATACAAATTTATAATCAACAATACTGGTGGCGATTA
ATTAACATACTTTATACAAATTTTCCGCTTCTTGTACGTTTGACAGGTTGCAAAATATTTAAAGAAAAAATTGCCATCCC
TTATTTATCGGAATGTCCTCCCAATCACTGGGCATTATCATTAGTAGGAGAGCGTTTACCGGACTGGATTTCTAAAAATT
ATAAGAGACCGGATCATTCACTGATAGAACAAGCTGTTCAACTTGACTGGGCTTTTACAGCTAGTTGGATTGCTTCTAAG
CATATTCCTTTGAATCTCTCAGAACTCAACAAACAAAATCCGGAAGAGATTTTAAGAAAAACACTTTTTCTTCAGCCTCA
TATTCATCTTTTTAAATGGAATGTTAATTTATTTTTATTTCGAGAAGAATTAATAAAACAAGATATCCATTATTGGACGA
ATCACCGCATTCCCCTACTTAAAAAAGAAGAGATTCATTACTACGTTCTTTATCGTACTGAAAAAAATATATTAGCGTGG
AGAGAGGTCTTAGAAGGAGAGTTTTTCTTACTTCAACTTCTTCAACAAGGCATAAGTCTTGAAAAAGCTTGCGAAAAGAT
TGAACAACAAAGTACAAAACTTTACGAGCAAGCTTGCAATCATCTACAAAAATGGATCCAAAATTGGGCTCAGCAACATT
GGCTAATTGAAAAATGA

Upstream 100 bases:

>100_bases
TTTTGAAGAAACTTGGAAAGAAGCTTTAAAAGCCAAACAATTTCAAAAAAATATTTCTTCTCCTTTACCCTCTTCTTTAG
TCAACTCTGTTTGAGGATAA

Downstream 100 bases:

>100_bases
AGAGGTCTTAGAAATAGACCCCAAAACCAGCCCCTAACTTCAAACCATCACAATTTAAGTGCTTCCAAACATGATTCCCA
TTAAAATCGTGTTTGCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNRIRNSSYKQVNIPKDLQLIQEWFANVITTPLAKNDTIHHKTKNGDLISEEAKNYIAPSPTLLPHQCIQIYNQQYWWRL
INILYTNFPLLVRLTGCKIFKEKIAIPYLSECPPNHWALSLVGERLPDWISKNYKRPDHSLIEQAVQLDWAFTASWIASK
HIPLNLSELNKQNPEEILRKTLFLQPHIHLFKWNVNLFLFREELIKQDIHYWTNHRIPLLKKEEIHYYVLYRTEKNILAW
REVLEGEFFLLQLLQQGISLEKACEKIEQQSTKLYEQACNHLQKWIQNWAQQHWLIEK

Sequences:

>Translated_298_residues
MNRIRNSSYKQVNIPKDLQLIQEWFANVITTPLAKNDTIHHKTKNGDLISEEAKNYIAPSPTLLPHQCIQIYNQQYWWRL
INILYTNFPLLVRLTGCKIFKEKIAIPYLSECPPNHWALSLVGERLPDWISKNYKRPDHSLIEQAVQLDWAFTASWIASK
HIPLNLSELNKQNPEEILRKTLFLQPHIHLFKWNVNLFLFREELIKQDIHYWTNHRIPLLKKEEIHYYVLYRTEKNILAW
REVLEGEFFLLQLLQQGISLEKACEKIEQQSTKLYEQACNHLQKWIQNWAQQHWLIEK
>Mature_298_residues
MNRIRNSSYKQVNIPKDLQLIQEWFANVITTPLAKNDTIHHKTKNGDLISEEAKNYIAPSPTLLPHQCIQIYNQQYWWRL
INILYTNFPLLVRLTGCKIFKEKIAIPYLSECPPNHWALSLVGERLPDWISKNYKRPDHSLIEQAVQLDWAFTASWIASK
HIPLNLSELNKQNPEEILRKTLFLQPHIHLFKWNVNLFLFREELIKQDIHYWTNHRIPLLKKEEIHYYVLYRTEKNILAW
REVLEGEFFLLQLLQQGISLEKACEKIEQQSTKLYEQACNHLQKWIQNWAQQHWLIEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35767; Mature: 35767

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIRNSSYKQVNIPKDLQLIQEWFANVITTPLAKNDTIHHKTKNGDLISEEAKNYIAPS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEHHHHHHCCCCC
PTLLPHQCIQIYNQQYWWRLINILYTNFPLLVRLTGCKIFKEKIAIPYLSECPPNHWALS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHCCCCCHHHHH
LVGERLPDWISKNYKRPDHSLIEQAVQLDWAFTASWIASKHIPLNLSELNKQNPEEILRK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
TLFLQPHIHLFKWNVNLFLFREELIKQDIHYWTNHRIPLLKKEEIHYYVLYRTEKNILAW
HHHCCCCEEEEEECCEEEEHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEECCCHHHHH
REVLEGEFFLLQLLQQGISLEKACEKIEQQSTKLYEQACNHLQKWIQNWAQQHWLIEK
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRIRNSSYKQVNIPKDLQLIQEWFANVITTPLAKNDTIHHKTKNGDLISEEAKNYIAPS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEHHHHHHCCCCC
PTLLPHQCIQIYNQQYWWRLINILYTNFPLLVRLTGCKIFKEKIAIPYLSECPPNHWALS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHCCCCCHHHHH
LVGERLPDWISKNYKRPDHSLIEQAVQLDWAFTASWIASKHIPLNLSELNKQNPEEILRK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
TLFLQPHIHLFKWNVNLFLFREELIKQDIHYWTNHRIPLLKKEEIHYYVLYRTEKNILAW
HHHCCCCEEEEEECCEEEEHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEECCCHHHHH
REVLEGEFFLLQLLQQGISLEKACEKIEQQSTKLYEQACNHLQKWIQNWAQQHWLIEK
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA