Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447498

Identifier: 46447498

GI number: 46447498

Start: 2224106

End: 2224738

Strand: Direct

Name: 46447498

Synonym: pc1864

Alternate gene names: NA

Gene position: 2224106-2224738 (Clockwise)

Preceding gene: 46447497

Following gene: 46447499

Centisome position: 92.12

GC content: 38.07

Gene sequence:

>633_bases
ATGAAGAAAGGTCTAACTCAATCAGCTTTAGCAGCTCTGGTGCTCGCATCAGCTCTGCCTATTGTCGCTCAAGCTGATCA
ACATTCGCAAGAGTTATTACTTGCAGCGGCTAGCTGTGGAGCTTATCATCCTAAACAAGGCAAAAGAGAAATTGCTGACA
ACTCTACTGGCACAAATTCCTATGTTGCGAACAATAATTCATACCAAATGAATTCAAATAGTAGCTATGAAAATATAAGC
AATACTTATAATGGGACAAGCACAAGTCCAGGAAATGATAGTGTAAGCACTCCAAATCTCAAGAATAATGACTGGAATGC
AGCGCATATCTCTAATCATTCTTATTCTCAAACGGGTACGCAGTATCAATCAAACGCTAATGGCTATCACAGTTATAACA
ATGCAGAAGAAGTTGATTATAATCATGCTACATCTGCAGTGTCTAATACAAGCTCTGAAGAGCAATTAGTGAGTTCACTT
AACGGTGAAACACGTAAGATCTATGATAGCTTAAGTACTCAAGGTAAGGCTTTAGCAATTCAATTAGCTAGCCAAGATAA
TTACCGTGATAAGAATTTGGCTGTTAAAGAAGCGCAAAAAAGAACTGAAAAAGCAGACGTAATGGTTCGTTAA

Upstream 100 bases:

>100_bases
ATAGATGCCAAAAACCCCAATGAAATGAATACAAGTGACGGAGTAACAACAAATCCGACGACTAAAAAATAATTACAAAT
TAAATTATGCGAGGAAAGTT

Downstream 100 bases:

>100_bases
TCTGTTTTGTCAAATAGATGCATGTGCGTGCCAGTAGTGGTTGCGCACATTTATTTTTCTAAACACCTTTAAAAGCTGAC
AAGTCACGTTCAATGACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKKGLTQSALAALVLASALPIVAQADQHSQELLLAAASCGAYHPKQGKREIADNSTGTNSYVANNNSYQMNSNSSYENIS
NTYNGTSTSPGNDSVSTPNLKNNDWNAAHISNHSYSQTGTQYQSNANGYHSYNNAEEVDYNHATSAVSNTSSEEQLVSSL
NGETRKIYDSLSTQGKALAIQLASQDNYRDKNLAVKEAQKRTEKADVMVR

Sequences:

>Translated_210_residues
MKKGLTQSALAALVLASALPIVAQADQHSQELLLAAASCGAYHPKQGKREIADNSTGTNSYVANNNSYQMNSNSSYENIS
NTYNGTSTSPGNDSVSTPNLKNNDWNAAHISNHSYSQTGTQYQSNANGYHSYNNAEEVDYNHATSAVSNTSSEEQLVSSL
NGETRKIYDSLSTQGKALAIQLASQDNYRDKNLAVKEAQKRTEKADVMVR
>Mature_210_residues
MKKGLTQSALAALVLASALPIVAQADQHSQELLLAAASCGAYHPKQGKREIADNSTGTNSYVANNNSYQMNSNSSYENIS
NTYNGTSTSPGNDSVSTPNLKNNDWNAAHISNHSYSQTGTQYQSNANGYHSYNNAEEVDYNHATSAVSNTSSEEQLVSSL
NGETRKIYDSLSTQGKALAIQLASQDNYRDKNLAVKEAQKRTEKADVMVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22691; Mature: 22691

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGLTQSALAALVLASALPIVAQADQHSQELLLAAASCGAYHPKQGKREIADNSTGTNS
CCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCC
YVANNNSYQMNSNSSYENISNTYNGTSTSPGNDSVSTPNLKNNDWNAAHISNHSYSQTGT
EEECCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
QYQSNANGYHSYNNAEEVDYNHATSAVSNTSSEEQLVSSLNGETRKIYDSLSTQGKALAI
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEE
QLASQDNYRDKNLAVKEAQKRTEKADVMVR
EECCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKGLTQSALAALVLASALPIVAQADQHSQELLLAAASCGAYHPKQGKREIADNSTGTNS
CCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCC
YVANNNSYQMNSNSSYENISNTYNGTSTSPGNDSVSTPNLKNNDWNAAHISNHSYSQTGT
EEECCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
QYQSNANGYHSYNNAEEVDYNHATSAVSNTSSEEQLVSSLNGETRKIYDSLSTQGKALAI
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEE
QLASQDNYRDKNLAVKEAQKRTEKADVMVR
EECCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA