Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447499

Identifier: 46447499

GI number: 46447499

Start: 2224854

End: 2225714

Strand: Direct

Name: 46447499

Synonym: pc1865

Alternate gene names: NA

Gene position: 2224854-2225714 (Clockwise)

Preceding gene: 46447498

Following gene: 46447500

Centisome position: 92.15

GC content: 35.42

Gene sequence:

>861_bases
ATGGCACCCCGTCAAATTCCAAATTTAGGCATTGGTATTGGATTACGTTTTCCCCATTTAGAAGATATTTTTAAATTCAA
GCCAGAAATCGATTGGTTTGAAATCATCAGTGAAAATTTTATGTTAGATGAGGGTAAGTCTTTAGAGTATTTACAAAAAA
TTTTAGAAAGCTATCCCGTAGTTCAACATGGGGTATCCTTGGCAATTGGAAGTTCTGCTCCTCTTGATTACGCGTACTTA
AAAAAACTCAAAGCACTCACTAAATTAACAAAAACTCCTTGGGTCTCTGATCACTTATGTTGGGGACACCAACCAGGCGC
TCATTACCATGACTTACTTCCACTTCCTTATACACGAGAAGTCGTTGATTATGTGGCAGAAAGAGCTCGGATTGTTCAAG
ATTATTTAGAAATTCCTTTTGCTTTAGAAAATCTTTCTTCTTATGTGGCATTTACACAAGATCAAATGCCAGAATGGGAA
TTTTATGCTGCCATTGTAGAAAAAGCAAACATTTACATGATGCTAGATGTCAATAATATTTATGTTTCTAGTCGAAATCA
TGGATTTGATCCCAAACTTTACTATCAAAATATTCCCCTAGAACGAGTCATTCAAATTCATTTAGCAGGTCACCAAGATT
TTGGGGATTATGTCTTAGATACACACGATCATCCCGTCAGAGATGAAGTCTGGGAATTATATGCAGAAATCTATCCATTG
ACTGGAGGAGTTTCTACTCTTCTTGAATGGGATGACAATCTTTTATCTTTTGAAGAAACTTGGAAAGAAGCTTTAAAAGC
CAAACAATTTCAAAAAAATATTTCTTCTCCTTTACCCTCTTCTTTAGTCAACTCTGTTTGA

Upstream 100 bases:

>100_bases
AGATGCATGTGCGTGCCAGTAGTGGTTGCGCACATTTATTTTTCTAAACACCTTTAAAAGCTGACAAGTCACGTTCAATG
ACTTTTTAGATAGGCAAAAA

Downstream 100 bases:

>100_bases
GGATAAATGAATAGAATTCGCAACTCAAGTTATAAACAAGTAAATATTCCAAAAGATCTTCAACTAATCCAGGAATGGTT
TGCAAATGTTATTACTACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MAPRQIPNLGIGIGLRFPHLEDIFKFKPEIDWFEIISENFMLDEGKSLEYLQKILESYPVVQHGVSLAIGSSAPLDYAYL
KKLKALTKLTKTPWVSDHLCWGHQPGAHYHDLLPLPYTREVVDYVAERARIVQDYLEIPFALENLSSYVAFTQDQMPEWE
FYAAIVEKANIYMMLDVNNIYVSSRNHGFDPKLYYQNIPLERVIQIHLAGHQDFGDYVLDTHDHPVRDEVWELYAEIYPL
TGGVSTLLEWDDNLLSFEETWKEALKAKQFQKNISSPLPSSLVNSV

Sequences:

>Translated_286_residues
MAPRQIPNLGIGIGLRFPHLEDIFKFKPEIDWFEIISENFMLDEGKSLEYLQKILESYPVVQHGVSLAIGSSAPLDYAYL
KKLKALTKLTKTPWVSDHLCWGHQPGAHYHDLLPLPYTREVVDYVAERARIVQDYLEIPFALENLSSYVAFTQDQMPEWE
FYAAIVEKANIYMMLDVNNIYVSSRNHGFDPKLYYQNIPLERVIQIHLAGHQDFGDYVLDTHDHPVRDEVWELYAEIYPL
TGGVSTLLEWDDNLLSFEETWKEALKAKQFQKNISSPLPSSLVNSV
>Mature_285_residues
APRQIPNLGIGIGLRFPHLEDIFKFKPEIDWFEIISENFMLDEGKSLEYLQKILESYPVVQHGVSLAIGSSAPLDYAYLK
KLKALTKLTKTPWVSDHLCWGHQPGAHYHDLLPLPYTREVVDYVAERARIVQDYLEIPFALENLSSYVAFTQDQMPEWEF
YAAIVEKANIYMMLDVNNIYVSSRNHGFDPKLYYQNIPLERVIQIHLAGHQDFGDYVLDTHDHPVRDEVWELYAEIYPLT
GGVSTLLEWDDNLLSFEETWKEALKAKQFQKNISSPLPSSLVNSV

Specific function: Unknown

COG id: COG3220

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0276 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007801
- InterPro:   IPR013022 [H]

Pfam domain/function: PF05114 DUF692 [H]

EC number: NA

Molecular weight: Translated: 33063; Mature: 32932

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRQIPNLGIGIGLRFPHLEDIFKFKPEIDWFEIISENFMLDEGKSLEYLQKILESYPV
CCCCCCCCCCEECCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCH
VQHGVSLAIGSSAPLDYAYLKKLKALTKLTKTPWVSDHLCWGHQPGAHYHDLLPLPYTRE
HHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCHHHH
VVDYVAERARIVQDYLEIPFALENLSSYVAFTQDQMPEWEFYAAIVEKANIYMMLDVNNI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECEE
YVSSRNHGFDPKLYYQNIPLERVIQIHLAGHQDFGDYVLDTHDHPVRDEVWELYAEIYPL
EEECCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCC
TGGVSTLLEWDDNLLSFEETWKEALKAKQFQKNISSPLPSSLVNSV
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
>Mature Secondary Structure 
APRQIPNLGIGIGLRFPHLEDIFKFKPEIDWFEIISENFMLDEGKSLEYLQKILESYPV
CCCCCCCCCEECCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCH
VQHGVSLAIGSSAPLDYAYLKKLKALTKLTKTPWVSDHLCWGHQPGAHYHDLLPLPYTRE
HHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCHHHH
VVDYVAERARIVQDYLEIPFALENLSSYVAFTQDQMPEWEFYAAIVEKANIYMMLDVNNI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECEE
YVSSRNHGFDPKLYYQNIPLERVIQIHLAGHQDFGDYVLDTHDHPVRDEVWELYAEIYPL
EEECCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCC
TGGVSTLLEWDDNLLSFEETWKEALKAKQFQKNISSPLPSSLVNSV
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA