| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is putP [H]
Identifier: 46447349
GI number: 46447349
Start: 2053532
End: 2054962
Strand: Direct
Name: putP [H]
Synonym: pc1715
Alternate gene names: 46447349
Gene position: 2053532-2054962 (Clockwise)
Preceding gene: 46447348
Following gene: 46447350
Centisome position: 85.05
GC content: 34.94
Gene sequence:
>1431_bases ATGCAAATTCAAGTCATTTTAGCATTTATTGCTTATTTTAGTTTACTTCTTCTCATTGGCCTTGTTTGTCATAAAAAACA AACAACCTCCTCTGATTTTATTATGGGCAACCGATCACTCAATTTCTGGCTGGTGGCTCTTTCTGCTCACGCAAGTGATA TGAGTGCTTGGCTTTTTATGGCATTTCCTATGACAATTTTCGTATTGGGACTTCCCTATATTTGGATTGCACTAGGACTT TTATTGGGAATGTTTTTCAACTGGCAATTCGTAGCCCCAAAATTACGCTCTATGACTGAAAGCTATGACACCTATACATT ATCTTCATTTTTTGAGAAAAGATTTAAAGACACTTCTGGATACATAAGGATTTTAAGTGCTATTATTATGCTTATTTTTC TTACTCATTATCTTTCAGCAGGTCTAATCGCAATGGGTTACTTGCTTGAATCATTATTTGGCCTTAACTACTACTTTGGT TTATCTGTTGCTATGTTGGTGGTAGTCGTCTACACATTTATTGGTGGATTTACAACAGTTGCTTGGACAGATTTGTTTCA AGGTGCTTTTCTTCTCCTAATGATTATTTTAGTTCCTACCATAGCAATGACAAAGATTGATAGCTGGCAAACCATTTCGC ATATGGCTCATCAAAAAAAAATTTCTTTATCTCTGTTTGGTGATAGTAGTCTGGACTCCTTTATCAAAATTTCTTCCTTG GCCTTGGGATGGGGACTTGGTTATTTTGGGATGCCTCATATTATCACTAAATTTATGGGTATTAAAGATGTCAATGAAAT GCACAAATCTAAATGGCTTGGCATGACATGGCAATTTGTTACTTTAGGAGCTGCTGCAGTCGTCGGCTTAATTGGAATTG CTTATTTTCCAAACGGCTTAGCTAAACCAGAAATGGTTTTTGTTGAAATGGTAAAGGATCTTTTTAATCCTTTTACAGCA GGCTTTATTTTATGTGCTGTGGTTGCGGCTAATATGTCAACAATGGATTCTCAAATCCTTGTTTGCGGTTCTATTTTAAG CGAAGATCTTTATAAATATTTTTATAAACAAACACCATCCGATCAAAAAATCCTTTGGGTTTCTAAAATGAGCGTTGTCA CGGTAGCTTTGATCGCTTTATTACTAGCATTCAATAAAAGTAATACAATTTTAGATACGGTTTTATATTCATGGTCAGGT CTTGGAAGTGCTTTTGGCCCATTAGTTTTAATGAGTTTATATTCTAAACAAACAAATCGTTATGGGGCAATTGCAGGAAT GATCACCGGAACTTTCGTCGTTGTGGTATGGCCTAGTTTAAACCCTCTATTATTTCGATATGAATTATTACCAATGATTC CTGGTTTTTTCACAAGTTTGACTGCCATTTATTTAGCTTCAAAATACACTCGAAAAAATTCTTTGAATTAA
Upstream 100 bases:
>100_bases CAGGGATAAGTAGCAAAGAAATTTTCGGGCAAAAAAGATCAATTTCACCATCAAGAATTTTAATAACGAAATGCGAACAT CATAAAACAGAGACGTAACT
Downstream 100 bases:
>100_bases ATCAGTACACTTATCAAATCTTCCTGAAAACTTCATTTCAGTATCAAATCTCTCCAACCAAAGAATTTTCATGATTTTGT TGGGGAGTTGGCTGTCTTTA
Product: sodium/proline symporter
Products: NA
Alternate protein names: Sodium/proline symporter [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MQIQVILAFIAYFSLLLLIGLVCHKKQTTSSDFIMGNRSLNFWLVALSAHASDMSAWLFMAFPMTIFVLGLPYIWIALGL LLGMFFNWQFVAPKLRSMTESYDTYTLSSFFEKRFKDTSGYIRILSAIIMLIFLTHYLSAGLIAMGYLLESLFGLNYYFG LSVAMLVVVVYTFIGGFTTVAWTDLFQGAFLLLMIILVPTIAMTKIDSWQTISHMAHQKKISLSLFGDSSLDSFIKISSL ALGWGLGYFGMPHIITKFMGIKDVNEMHKSKWLGMTWQFVTLGAAAVVGLIGIAYFPNGLAKPEMVFVEMVKDLFNPFTA GFILCAVVAANMSTMDSQILVCGSILSEDLYKYFYKQTPSDQKILWVSKMSVVTVALIALLLAFNKSNTILDTVLYSWSG LGSAFGPLVLMSLYSKQTNRYGAIAGMITGTFVVVVWPSLNPLLFRYELLPMIPGFFTSLTAIYLASKYTRKNSLN
Sequences:
>Translated_476_residues MQIQVILAFIAYFSLLLLIGLVCHKKQTTSSDFIMGNRSLNFWLVALSAHASDMSAWLFMAFPMTIFVLGLPYIWIALGL LLGMFFNWQFVAPKLRSMTESYDTYTLSSFFEKRFKDTSGYIRILSAIIMLIFLTHYLSAGLIAMGYLLESLFGLNYYFG LSVAMLVVVVYTFIGGFTTVAWTDLFQGAFLLLMIILVPTIAMTKIDSWQTISHMAHQKKISLSLFGDSSLDSFIKISSL ALGWGLGYFGMPHIITKFMGIKDVNEMHKSKWLGMTWQFVTLGAAAVVGLIGIAYFPNGLAKPEMVFVEMVKDLFNPFTA GFILCAVVAANMSTMDSQILVCGSILSEDLYKYFYKQTPSDQKILWVSKMSVVTVALIALLLAFNKSNTILDTVLYSWSG LGSAFGPLVLMSLYSKQTNRYGAIAGMITGTFVVVVWPSLNPLLFRYELLPMIPGFFTSLTAIYLASKYTRKNSLN >Mature_476_residues MQIQVILAFIAYFSLLLLIGLVCHKKQTTSSDFIMGNRSLNFWLVALSAHASDMSAWLFMAFPMTIFVLGLPYIWIALGL LLGMFFNWQFVAPKLRSMTESYDTYTLSSFFEKRFKDTSGYIRILSAIIMLIFLTHYLSAGLIAMGYLLESLFGLNYYFG LSVAMLVVVVYTFIGGFTTVAWTDLFQGAFLLLMIILVPTIAMTKIDSWQTISHMAHQKKISLSLFGDSSLDSFIKISSL ALGWGLGYFGMPHIITKFMGIKDVNEMHKSKWLGMTWQFVTLGAAAVVGLIGIAYFPNGLAKPEMVFVEMVKDLFNPFTA GFILCAVVAANMSTMDSQILVCGSILSEDLYKYFYKQTPSDQKILWVSKMSVVTVALIALLLAFNKSNTILDTVLYSWSG LGSAFGPLVLMSLYSKQTNRYGAIAGMITGTFVVVVWPSLNPLLFRYELLPMIPGFFTSLTAIYLASKYTRKNSLN
Specific function: Catalyzes the sodium-dependent uptake of extracellular proline [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=477, Percent_Identity=41.0901467505241, Blast_Score=350, Evalue=2e-96, Organism=Homo sapiens, GI11141885, Length=497, Percent_Identity=23.3400402414487, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI256985183, Length=430, Percent_Identity=21.1627906976744, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4507035, Length=382, Percent_Identity=22.2513089005236, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1787251, Length=465, Percent_Identity=39.7849462365591, Blast_Score=325, Evalue=3e-90, Organism=Escherichia coli, GI87082237, Length=478, Percent_Identity=24.4769874476987, Blast_Score=118, Evalue=9e-28, Organism=Escherichia coli, GI1790503, Length=470, Percent_Identity=25.9574468085106, Blast_Score=111, Evalue=1e-25, Organism=Drosophila melanogaster, GI28573698, Length=475, Percent_Identity=21.2631578947368, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI221459584, Length=376, Percent_Identity=19.6808510638298, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 53170; Mature: 53170
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIQVILAFIAYFSLLLLIGLVCHKKQTTSSDFIMGNRSLNFWLVALSAHASDMSAWLFM CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEECCCCHHHHHHHH AFPMTIFVLGLPYIWIALGLLLGMFFNWQFVAPKLRSMTESYDTYTLSSFFEKRFKDTSG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHCHHHHHHHHHHHHCCCHH YIRILSAIIMLIFLTHYLSAGLIAMGYLLESLFGLNYYFGLSVAMLVVVVYTFIGGFTTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWTDLFQGAFLLLMIILVPTIAMTKIDSWQTISHMAHQKKISLSLFGDSSLDSFIKISSL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHH ALGWGLGYFGMPHIITKFMGIKDVNEMHKSKWLGMTWQFVTLGAAAVVGLIGIAYFPNGL HHHHCCHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC AKPEMVFVEMVKDLFNPFTAGFILCAVVAANMSTMDSQILVCGSILSEDLYKYFYKQTPS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC DQKILWVSKMSVVTVALIALLLAFNKSNTILDTVLYSWSGLGSAFGPLVLMSLYSKQTNR CCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC YGAIAGMITGTFVVVVWPSLNPLLFRYELLPMIPGFFTSLTAIYLASKYTRKNSLN HHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQIQVILAFIAYFSLLLLIGLVCHKKQTTSSDFIMGNRSLNFWLVALSAHASDMSAWLFM CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEECCCCHHHHHHHH AFPMTIFVLGLPYIWIALGLLLGMFFNWQFVAPKLRSMTESYDTYTLSSFFEKRFKDTSG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHCHHHHHHHHHHHHCCCHH YIRILSAIIMLIFLTHYLSAGLIAMGYLLESLFGLNYYFGLSVAMLVVVVYTFIGGFTTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWTDLFQGAFLLLMIILVPTIAMTKIDSWQTISHMAHQKKISLSLFGDSSLDSFIKISSL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHH ALGWGLGYFGMPHIITKFMGIKDVNEMHKSKWLGMTWQFVTLGAAAVVGLIGIAYFPNGL HHHHCCHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC AKPEMVFVEMVKDLFNPFTAGFILCAVVAANMSTMDSQILVCGSILSEDLYKYFYKQTPS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC DQKILWVSKMSVVTVALIALLLAFNKSNTILDTVLYSWSGLGSAFGPLVLMSLYSKQTNR CCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC YGAIAGMITGTFVVVVWPSLNPLLFRYELLPMIPGFFTSLTAIYLASKYTRKNSLN HHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]